Gene : Glyma.01G160200 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR33070:SF3 - EXPRESSED PROTEIN Genomic Order:  1602
Name:  ? Glyma.01G160200 Secondary Identifier:  ? PAC:30541627
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G160200 0.5kb upstream 0.5kb upstream 1400 true Chr01: 49875293-49876692 Glycine max
Glyma.01G160200 0.5kb upstream 0.5kb upstream 500 false Chr01: 49875293-49875792 Glycine max
Glyma.01G160200 0.5kb downstream 0.5kb downstream 1400 true Chr01: 49875793-49877192 Glycine max
Glyma.01G160200 0.5kb downstream 0.5kb downstream 500 false Chr01: 49876693-49877192 Glycine max
Glyma.01G160200 1.0kb upstream 1.0kb upstream 1900 true Chr01: 49874793-49876692 Glycine max
Glyma.01G160200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 49874793-49875792 Glycine max
Glyma.01G160200 1.0kb downstream 1.0kb downstream 1900 true Chr01: 49875793-49877692 Glycine max
Glyma.01G160200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 49876693-49877692 Glycine max
Glyma.01G160200 2.0kb upstream 2.0kb upstream 2900 true Chr01: 49873793-49876692 Glycine max
Glyma.01G160200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 49873793-49875792 Glycine max
Glyma.01G160200 2.0kb downstream 2.0kb downstream 2900 true Chr01: 49875793-49878692 Glycine max
Glyma.01G160200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 49876693-49878692 Glycine max
Glyma.01G160200 5.0kb upstream 5.0kb upstream 5900 true Chr01: 49870793-49876692 Glycine max
Glyma.01G160200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 49870793-49875792 Glycine max
Glyma.01G160200 5.0kb downstream 5.0kb downstream 5900 true Chr01: 49875793-49881692 Glycine max
Glyma.01G160200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 49876693-49881692 Glycine max
Glyma.01G160200 10.0kb upstream 10.0kb upstream 10900 true Chr01: 49865793-49876692 Glycine max
Glyma.01G160200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 49865793-49875792 Glycine max
Glyma.01G160200 10.0kb downstream 10.0kb downstream 10900 true Chr01: 49875793-49886692 Glycine max
Glyma.01G160200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 49876693-49886692 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314618 5265 Fabidae View MSA
124069570 5270 Rosid View MSA
123753428 5271 Pentapetalae View MSA
122797760 5272 Eudicot View MSA
122043809 5273 Angiosperm View MSA
121310191 5274 Embryophyte View MSA
123347751 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.094274 0.0 0.38504 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0224597 0.0 0.103184 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0260389 0.0 0.117774 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain