Gene : Glyma.18G267200 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR31413:SF4 - NINJA-FAMILY PROTEIN AFP1-RELATED Genomic Order:  2672
Name:  ? Glyma.18G267200 Secondary Identifier:  ? PAC:30554709
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G267200 0.5kb upstream 0.5kb upstream 5483 true Chr18: 55161119-55166601 Glycine max
Glyma.18G267200 0.5kb upstream 0.5kb upstream 500 false Chr18: 55166102-55166601 Glycine max
Glyma.18G267200 0.5kb downstream 0.5kb downstream 5483 true Chr18: 55160619-55166101 Glycine max
Glyma.18G267200 0.5kb downstream 0.5kb downstream 500 false Chr18: 55160619-55161118 Glycine max
Glyma.18G267200 1.0kb upstream 1.0kb upstream 5983 true Chr18: 55161119-55167101 Glycine max
Glyma.18G267200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 55166102-55167101 Glycine max
Glyma.18G267200 1.0kb downstream 1.0kb downstream 5983 true Chr18: 55160119-55166101 Glycine max
Glyma.18G267200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 55160119-55161118 Glycine max
Glyma.18G267200 2.0kb upstream 2.0kb upstream 6983 true Chr18: 55161119-55168101 Glycine max
Glyma.18G267200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 55166102-55168101 Glycine max
Glyma.18G267200 2.0kb downstream 2.0kb downstream 6983 true Chr18: 55159119-55166101 Glycine max
Glyma.18G267200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 55159119-55161118 Glycine max
Glyma.18G267200 5.0kb upstream 5.0kb upstream 9983 true Chr18: 55161119-55171101 Glycine max
Glyma.18G267200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 55166102-55171101 Glycine max
Glyma.18G267200 5.0kb downstream 5.0kb downstream 9983 true Chr18: 55156119-55166101 Glycine max
Glyma.18G267200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 55156119-55161118 Glycine max
Glyma.18G267200 10.0kb upstream 10.0kb upstream 14983 true Chr18: 55161119-55176101 Glycine max
Glyma.18G267200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 55166102-55176101 Glycine max
Glyma.18G267200 10.0kb downstream 10.0kb downstream 14983 true Chr18: 55151119-55166101 Glycine max
Glyma.18G267200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 55151119-55161118 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315194 5265 Fabidae View MSA
124071046 5270 Rosid View MSA
123753389 5271 Pentapetalae View MSA
122792096 5272 Eudicot View MSA
122050177 5273 Angiosperm View MSA
121311781 5274 Embryophyte View MSA
123349031 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.9294 0.0 61.4234    
cufflinks 26.4184 0.0 80.9146 High  
cufflinks 20.2821 0.0 69.95 High  
cufflinks 16.0105 0.0 49.2562    
cufflinks 13.9097 0.0 42.377    
cufflinks 44.1401 0.0 146.059 High High
cufflinks 47.2037 0.0 161.391 High High
cufflinks 16.9712 0.0 51.6019    
cufflinks 10.669 0.0 33.1895   Low
cufflinks 6.156        
cufflinks 1.921       Low
cufflinks 5.543        
cufflinks 4.748        
cufflinks 3.088        
cufflinks 4.539        
cufflinks 7.778     High  
cufflinks 11.651     High High
cufflinks 5.006        
cufflinks 5.785        
cufflinks 7.583     High  
cufflinks 1.563       Low
cufflinks 7.058        
cufflinks 7.649     High  
cufflinks 2.368       Low
cufflinks 7.506     High  
cufflinks 3.349        

0 Strain