Gene : Glyma.01G158900 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG4253 - Tryptophan-rich basic nuclear protein Genomic Order:  1589
Name:  ? Glyma.01G158900 Secondary Identifier:  ? PAC:30541926
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G158900 0.5kb upstream 0.5kb upstream 4316 true Chr01: 49692664-49696979 Glycine max
Glyma.01G158900 0.5kb upstream 0.5kb upstream 500 false Chr01: 49692664-49693163 Glycine max
Glyma.01G158900 0.5kb downstream 0.5kb downstream 4316 true Chr01: 49693164-49697479 Glycine max
Glyma.01G158900 0.5kb downstream 0.5kb downstream 500 false Chr01: 49696980-49697479 Glycine max
Glyma.01G158900 1.0kb upstream 1.0kb upstream 4816 true Chr01: 49692164-49696979 Glycine max
Glyma.01G158900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 49692164-49693163 Glycine max
Glyma.01G158900 1.0kb downstream 1.0kb downstream 4816 true Chr01: 49693164-49697979 Glycine max
Glyma.01G158900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 49696980-49697979 Glycine max
Glyma.01G158900 2.0kb upstream 2.0kb upstream 5816 true Chr01: 49691164-49696979 Glycine max
Glyma.01G158900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 49691164-49693163 Glycine max
Glyma.01G158900 2.0kb downstream 2.0kb downstream 5816 true Chr01: 49693164-49698979 Glycine max
Glyma.01G158900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 49696980-49698979 Glycine max
Glyma.01G158900 5.0kb upstream 5.0kb upstream 8816 true Chr01: 49688164-49696979 Glycine max
Glyma.01G158900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 49688164-49693163 Glycine max
Glyma.01G158900 5.0kb downstream 5.0kb downstream 8816 true Chr01: 49693164-49701979 Glycine max
Glyma.01G158900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 49696980-49701979 Glycine max
Glyma.01G158900 10.0kb upstream 10.0kb upstream 13816 true Chr01: 49683164-49696979 Glycine max
Glyma.01G158900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 49683164-49693163 Glycine max
Glyma.01G158900 10.0kb downstream 10.0kb downstream 13816 true Chr01: 49693164-49706979 Glycine max
Glyma.01G158900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 49696980-49706979 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254052 5265 Fabidae View MSA
123996385 5270 Rosid View MSA
123747938 5271 Pentapetalae View MSA
122785661 5272 Eudicot View MSA
122042993 5273 Angiosperm View MSA
121344055 5274 Embryophyte View MSA
123425575 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0246851 0.0 0.843558 Low Low
cufflinks 0.456529 0.0 3.90746   High
cufflinks 0.0275124 0.0 0.961495 Low Low
cufflinks 0.242212 0.0 2.67788    
cufflinks 0.143966 0.0 2.07907 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0506661 0.0 1.15761 Low  
cufflinks 0.586121 0.0 4.87656   High
cufflinks 0.012     Low  
cufflinks 0.005     Low  
cufflinks 0.148       High
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.122       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.441       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain