Gene : Glyma.01G171300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR23070//PTHR23070:SF12 - BCS1 AAA-TYPE ATPASE Genomic Order:  1713
Name:  ? Glyma.01G171300 Secondary Identifier:  ? PAC:30543385
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G171300 0.5kb upstream 0.5kb upstream 2314 true Chr01: 50860046-50862359 Glycine max
Glyma.01G171300 0.5kb upstream 0.5kb upstream 500 false Chr01: 50861860-50862359 Glycine max
Glyma.01G171300 0.5kb downstream 0.5kb downstream 2314 true Chr01: 50859546-50861859 Glycine max
Glyma.01G171300 0.5kb downstream 0.5kb downstream 500 false Chr01: 50859546-50860045 Glycine max
Glyma.01G171300 1.0kb upstream 1.0kb upstream 2814 true Chr01: 50860046-50862859 Glycine max
Glyma.01G171300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50861860-50862859 Glycine max
Glyma.01G171300 1.0kb downstream 1.0kb downstream 2814 true Chr01: 50859046-50861859 Glycine max
Glyma.01G171300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50859046-50860045 Glycine max
Glyma.01G171300 2.0kb upstream 2.0kb upstream 3814 true Chr01: 50860046-50863859 Glycine max
Glyma.01G171300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50861860-50863859 Glycine max
Glyma.01G171300 2.0kb downstream 2.0kb downstream 3814 true Chr01: 50858046-50861859 Glycine max
Glyma.01G171300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50858046-50860045 Glycine max
Glyma.01G171300 5.0kb upstream 5.0kb upstream 6814 true Chr01: 50860046-50866859 Glycine max
Glyma.01G171300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50861860-50866859 Glycine max
Glyma.01G171300 5.0kb downstream 5.0kb downstream 6814 true Chr01: 50855046-50861859 Glycine max
Glyma.01G171300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50855046-50860045 Glycine max
Glyma.01G171300 10.0kb upstream 10.0kb upstream 11814 true Chr01: 50860046-50871859 Glycine max
Glyma.01G171300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50861860-50871859 Glycine max
Glyma.01G171300 10.0kb downstream 10.0kb downstream 11814 true Chr01: 50850046-50861859 Glycine max
Glyma.01G171300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50850046-50860045 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657512 5273 Angiosperm View MSA
122255315 5265 Fabidae View MSA
124039441 5270 Rosid View MSA
123611319 5271 Pentapetalae View MSA
122645890 5272 Eudicot View MSA
120929553 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.235469 0.0 0.901241   Low
cufflinks 0.763186 0.0 2.75153    
cufflinks 0.153318 0.0 0.597181 Low Low
cufflinks 0.751285 0.0 2.71052    
cufflinks 3.18403 0.0 9.81028    
cufflinks 4.97782 0.0 14.447   High
cufflinks 0.239529 0.0 0.916247   Low
cufflinks 1.33843 0.0 4.61029    
cufflinks 5.4431 0.0 15.5968   High
cufflinks 0.999        
cufflinks 9.023     High High
cufflinks 0.57        
cufflinks 5.716        
cufflinks 7.209     High  
cufflinks 29.606     High High
cufflinks 0.99        
cufflinks 0.885        
cufflinks 0.999        
cufflinks 0.334       Low
cufflinks 0.617        
cufflinks 7.289     High  
cufflinks 0.653        
cufflinks 0.535        
cufflinks 6.517     High  
cufflinks 0.703        
cufflinks 10.067     High High

0 Strain