Gene : Glyma.01G170900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10168:SF116 - GLUTAREDOXIN-C3 Genomic Order:  1709
Name:  ? Glyma.01G170900 Secondary Identifier:  ? PAC:30544040
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax THIOREDOX-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G170900 0.5kb upstream 0.5kb upstream 1947 true Chr01: 50830574-50832520 Glycine max
Glyma.01G170900 0.5kb upstream 0.5kb upstream 500 false Chr01: 50832021-50832520 Glycine max
Glyma.01G170900 0.5kb downstream 0.5kb downstream 1947 true Chr01: 50830074-50832020 Glycine max
Glyma.01G170900 0.5kb downstream 0.5kb downstream 500 false Chr01: 50830074-50830573 Glycine max
Glyma.01G170900 1.0kb upstream 1.0kb upstream 2447 true Chr01: 50830574-50833020 Glycine max
Glyma.01G170900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50832021-50833020 Glycine max
Glyma.01G170900 1.0kb downstream 1.0kb downstream 2447 true Chr01: 50829574-50832020 Glycine max
Glyma.01G170900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50829574-50830573 Glycine max
Glyma.01G170900 2.0kb upstream 2.0kb upstream 3447 true Chr01: 50830574-50834020 Glycine max
Glyma.01G170900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50832021-50834020 Glycine max
Glyma.01G170900 2.0kb downstream 2.0kb downstream 3447 true Chr01: 50828574-50832020 Glycine max
Glyma.01G170900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50828574-50830573 Glycine max
Glyma.01G170900 5.0kb upstream 5.0kb upstream 6447 true Chr01: 50830574-50837020 Glycine max
Glyma.01G170900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50832021-50837020 Glycine max
Glyma.01G170900 5.0kb downstream 5.0kb downstream 6447 true Chr01: 50825574-50832020 Glycine max
Glyma.01G170900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50825574-50830573 Glycine max
Glyma.01G170900 10.0kb upstream 10.0kb upstream 11447 true Chr01: 50830574-50842020 Glycine max
Glyma.01G170900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50832021-50842020 Glycine max
Glyma.01G170900 10.0kb downstream 10.0kb downstream 11447 true Chr01: 50820574-50832020 Glycine max
Glyma.01G170900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50820574-50830573 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297294 5265 Fabidae View MSA
124064046 5270 Rosid View MSA
123741506 5271 Pentapetalae View MSA
122793687 5272 Eudicot View MSA
122043796 5273 Angiosperm View MSA
121344746 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.7077 0.0 87.4151    
cufflinks 15.5808 0.0 79.331    
cufflinks 22.4908 0.0 106.2 High  
cufflinks 13.328 0.0 78.7779   Low
cufflinks 21.2255 0.0 96.7724 High  
cufflinks 26.4711 0.0 120.388 High High
cufflinks 32.0947 0.0 148.312 High High
cufflinks 19.1843 0.0 91.572    
cufflinks 18.8152 0.0 95.2752    
cufflinks 6.468        
cufflinks 9.174     High  
cufflinks 9.424     High High
cufflinks 8.483     High  
cufflinks 11.715     High High
cufflinks 6.34     High  
cufflinks 4.3       Low
cufflinks 6.567     High  
cufflinks 9.468     High High
cufflinks 6.589        
cufflinks 4.211       Low
cufflinks 6.563     High  
cufflinks 4.861       Low
cufflinks 5.196        
cufflinks 11.275     High High
cufflinks 4.475       Low
cufflinks 5.937        

0 Strain