Gene : Glyma.01G164900 G. max Wm82.a2.v1
Defline:  (1 of 10) PF06911 - Senescence-associated protein (Senescence) Genomic Order:  1649
Name:  ? Glyma.01G164900 Secondary Identifier:  ? PAC:30544777
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G164900 0.5kb upstream 0.5kb upstream 6131 true Chr01: 50241041-50247171 Glycine max
Glyma.01G164900 0.5kb upstream 0.5kb upstream 500 false Chr01: 50246672-50247171 Glycine max
Glyma.01G164900 0.5kb downstream 0.5kb downstream 6131 true Chr01: 50240541-50246671 Glycine max
Glyma.01G164900 0.5kb downstream 0.5kb downstream 500 false Chr01: 50240541-50241040 Glycine max
Glyma.01G164900 1.0kb upstream 1.0kb upstream 6631 true Chr01: 50241041-50247671 Glycine max
Glyma.01G164900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50246672-50247671 Glycine max
Glyma.01G164900 1.0kb downstream 1.0kb downstream 6631 true Chr01: 50240041-50246671 Glycine max
Glyma.01G164900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50240041-50241040 Glycine max
Glyma.01G164900 2.0kb upstream 2.0kb upstream 7631 true Chr01: 50241041-50248671 Glycine max
Glyma.01G164900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50246672-50248671 Glycine max
Glyma.01G164900 2.0kb downstream 2.0kb downstream 7631 true Chr01: 50239041-50246671 Glycine max
Glyma.01G164900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50239041-50241040 Glycine max
Glyma.01G164900 5.0kb upstream 5.0kb upstream 10631 true Chr01: 50241041-50251671 Glycine max
Glyma.01G164900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50246672-50251671 Glycine max
Glyma.01G164900 5.0kb downstream 5.0kb downstream 10631 true Chr01: 50236041-50246671 Glycine max
Glyma.01G164900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50236041-50241040 Glycine max
Glyma.01G164900 10.0kb upstream 10.0kb upstream 15631 true Chr01: 50241041-50256671 Glycine max
Glyma.01G164900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50246672-50256671 Glycine max
Glyma.01G164900 10.0kb downstream 10.0kb downstream 15631 true Chr01: 50231041-50246671 Glycine max
Glyma.01G164900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50231041-50241040 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314180 5265 Fabidae View MSA
124072707 5270 Rosid View MSA
123750901 5271 Pentapetalae View MSA
122796418 5272 Eudicot View MSA
122046624 5273 Angiosperm View MSA
121350646 5274 Embryophyte View MSA
123428517 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.1281 0.0 22.2274    
cufflinks 5.71757 0.0 16.1818   Low
cufflinks 10.1214 0.0 27.3682    
cufflinks 11.8827 0.0 31.895    
cufflinks 9.35271 0.0 25.3192    
cufflinks 13.3611 0.0 35.7195   High
cufflinks 4.80464 0.0 13.8168   Low
cufflinks 14.1272 0.0 37.7487   High
cufflinks 9.78162 0.0 26.4641    
cufflinks 2.726        
cufflinks 3.397        
cufflinks 2.276        
cufflinks 2.576        
cufflinks 1.94        
cufflinks 1.694        
cufflinks 2.25        
cufflinks 5.657       High
cufflinks 2.002        
cufflinks 2.064        
cufflinks 1.48       Low
cufflinks 3.649        
cufflinks 1.861        
cufflinks 2.059        
cufflinks 4.882       High
cufflinks 1.619       Low
cufflinks 5.346       High

0 Strain