Gene : Glyma.01G174800 G. max Wm82.a2.v1
Genomic Order:  1748 Name:  ? Glyma.01G174800
Secondary Identifier:  ? PAC:30542526
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G174800 0.5kb upstream 0.5kb upstream 695 true Chr01: 51145530-51146224 Glycine max
Glyma.01G174800 0.5kb upstream 0.5kb upstream 500 false Chr01: 51145530-51146029 Glycine max
Glyma.01G174800 0.5kb downstream 0.5kb downstream 695 true Chr01: 51146030-51146724 Glycine max
Glyma.01G174800 0.5kb downstream 0.5kb downstream 500 false Chr01: 51146225-51146724 Glycine max
Glyma.01G174800 1.0kb upstream 1.0kb upstream 1195 true Chr01: 51145030-51146224 Glycine max
Glyma.01G174800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 51145030-51146029 Glycine max
Glyma.01G174800 1.0kb downstream 1.0kb downstream 1195 true Chr01: 51146030-51147224 Glycine max
Glyma.01G174800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 51146225-51147224 Glycine max
Glyma.01G174800 2.0kb upstream 2.0kb upstream 2195 true Chr01: 51144030-51146224 Glycine max
Glyma.01G174800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 51144030-51146029 Glycine max
Glyma.01G174800 2.0kb downstream 2.0kb downstream 2195 true Chr01: 51146030-51148224 Glycine max
Glyma.01G174800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 51146225-51148224 Glycine max
Glyma.01G174800 5.0kb upstream 5.0kb upstream 5195 true Chr01: 51141030-51146224 Glycine max
Glyma.01G174800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 51141030-51146029 Glycine max
Glyma.01G174800 5.0kb downstream 5.0kb downstream 5195 true Chr01: 51146030-51151224 Glycine max
Glyma.01G174800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 51146225-51151224 Glycine max
Glyma.01G174800 10.0kb upstream 10.0kb upstream 10195 true Chr01: 51136030-51146224 Glycine max
Glyma.01G174800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 51136030-51146029 Glycine max
Glyma.01G174800 10.0kb downstream 10.0kb downstream 10195 true Chr01: 51146030-51156224 Glycine max
Glyma.01G174800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 51146225-51156224 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121614029 5273 Angiosperm Singleton cluster - no MSA
122248258 5265 Fabidae Singleton cluster - no MSA
123991894 5270 Rosid Singleton cluster - no MSA
123566808 5271 Pentapetalae Singleton cluster - no MSA
122601563 5272 Eudicot Singleton cluster - no MSA
120886240 5274 Embryophyte Singleton cluster - no MSA
122927011 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.22691 0.0 28.0347   Low
cufflinks 28.7733 0.0 103.844 High  
cufflinks 8.84725 0.0 33.7215   Low
cufflinks 55.3848 0.0 188.45 High High
cufflinks 37.3357 0.0 131.493 High  
cufflinks 34.5813 0.0 123.804 High  
cufflinks 30.3259 0.0 109.034 High  
cufflinks 34.49 0.0 121.971 High  
cufflinks 26.457 0.0 95.509 High  
cufflinks 7.094       High
cufflinks 3.336        
cufflinks 4.047        
cufflinks 9.315     High High
cufflinks 12.074     High High
cufflinks 2.753        
cufflinks 1.72        
cufflinks 1.553        
cufflinks 10.016     High High
cufflinks 3.977        
cufflinks 0.903       Low
cufflinks 2.839        
cufflinks 1.393       Low
cufflinks 1.281       Low
cufflinks 2.929        
cufflinks 1.441        
cufflinks 3.692        

0 Strain