Gene : Glyma.01G173700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR16517:SF40 - TUBBY-LIKE F-BOX PROTEIN 11-RELATED Genomic Order:  1737
Name:  ? Glyma.01G173700 Secondary Identifier:  ? PAC:30544987
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G173700 0.5kb upstream 0.5kb upstream 3888 true Chr01: 51062097-51065984 Glycine max
Glyma.01G173700 0.5kb upstream 0.5kb upstream 500 false Chr01: 51062097-51062596 Glycine max
Glyma.01G173700 0.5kb downstream 0.5kb downstream 3888 true Chr01: 51062597-51066484 Glycine max
Glyma.01G173700 0.5kb downstream 0.5kb downstream 500 false Chr01: 51065985-51066484 Glycine max
Glyma.01G173700 1.0kb upstream 1.0kb upstream 4388 true Chr01: 51061597-51065984 Glycine max
Glyma.01G173700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 51061597-51062596 Glycine max
Glyma.01G173700 1.0kb downstream 1.0kb downstream 4388 true Chr01: 51062597-51066984 Glycine max
Glyma.01G173700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 51065985-51066984 Glycine max
Glyma.01G173700 2.0kb upstream 2.0kb upstream 5388 true Chr01: 51060597-51065984 Glycine max
Glyma.01G173700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 51060597-51062596 Glycine max
Glyma.01G173700 2.0kb downstream 2.0kb downstream 5388 true Chr01: 51062597-51067984 Glycine max
Glyma.01G173700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 51065985-51067984 Glycine max
Glyma.01G173700 5.0kb upstream 5.0kb upstream 8388 true Chr01: 51057597-51065984 Glycine max
Glyma.01G173700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 51057597-51062596 Glycine max
Glyma.01G173700 5.0kb downstream 5.0kb downstream 8388 true Chr01: 51062597-51070984 Glycine max
Glyma.01G173700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 51065985-51070984 Glycine max
Glyma.01G173700 10.0kb upstream 10.0kb upstream 13388 true Chr01: 51052597-51065984 Glycine max
Glyma.01G173700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 51052597-51062596 Glycine max
Glyma.01G173700 10.0kb downstream 10.0kb downstream 13388 true Chr01: 51062597-51075984 Glycine max
Glyma.01G173700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 51065985-51075984 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311486 5265 Fabidae View MSA
124064248 5270 Rosid View MSA
123747341 5271 Pentapetalae View MSA
122790799 5272 Eudicot View MSA
122049170 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121348967 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.3181 0.0 32.9153   Low
cufflinks 14.0063 0.0 48.1118    
cufflinks 14.092 0.0 48.6276    
cufflinks 14.4675 0.0 49.714    
cufflinks 13.1895 0.0 45.3223    
cufflinks 15.3622 0.0 52.8355    
cufflinks 14.6167 0.0 50.3636    
cufflinks 17.0037 0.0 58.6938   High
cufflinks 13.1586 0.0 45.49    
cufflinks 4.505        
cufflinks 3.408        
cufflinks 4.041        
cufflinks 3.412        
cufflinks 2.885       Low
cufflinks 5.271     High  
cufflinks 5.052        
cufflinks 1.923       Low
cufflinks 4.928        
cufflinks 5.508       High
cufflinks 5.001        
cufflinks 3.746        
cufflinks 4.98        
cufflinks 4.393        
cufflinks 4.218        
cufflinks 5.366        
cufflinks 3.057       Low

0 Strain