Gene : Glyma.01G177500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR24326:SF281 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-21-RELATED Genomic Order:  1775
Name:  ? Glyma.01G177500 Secondary Identifier:  ? PAC:30544617
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G177500 0.5kb upstream 0.5kb upstream 2868 true Chr01: 51388319-51391186 Glycine max
Glyma.01G177500 0.5kb upstream 0.5kb upstream 500 false Chr01: 51390687-51391186 Glycine max
Glyma.01G177500 0.5kb downstream 0.5kb downstream 2868 true Chr01: 51387819-51390686 Glycine max
Glyma.01G177500 0.5kb downstream 0.5kb downstream 500 false Chr01: 51387819-51388318 Glycine max
Glyma.01G177500 1.0kb upstream 1.0kb upstream 3368 true Chr01: 51388319-51391686 Glycine max
Glyma.01G177500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 51390687-51391686 Glycine max
Glyma.01G177500 1.0kb downstream 1.0kb downstream 3368 true Chr01: 51387319-51390686 Glycine max
Glyma.01G177500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 51387319-51388318 Glycine max
Glyma.01G177500 2.0kb upstream 2.0kb upstream 4368 true Chr01: 51388319-51392686 Glycine max
Glyma.01G177500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 51390687-51392686 Glycine max
Glyma.01G177500 2.0kb downstream 2.0kb downstream 4368 true Chr01: 51386319-51390686 Glycine max
Glyma.01G177500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 51386319-51388318 Glycine max
Glyma.01G177500 5.0kb upstream 5.0kb upstream 7368 true Chr01: 51388319-51395686 Glycine max
Glyma.01G177500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 51390687-51395686 Glycine max
Glyma.01G177500 5.0kb downstream 5.0kb downstream 7368 true Chr01: 51383319-51390686 Glycine max
Glyma.01G177500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 51383319-51388318 Glycine max
Glyma.01G177500 10.0kb upstream 10.0kb upstream 12368 true Chr01: 51388319-51400686 Glycine max
Glyma.01G177500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 51390687-51400686 Glycine max
Glyma.01G177500 10.0kb downstream 10.0kb downstream 12368 true Chr01: 51378319-51390686 Glycine max
Glyma.01G177500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 51378319-51388318 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308110 5265 Fabidae View MSA
124061300 5270 Rosid View MSA
123736680 5271 Pentapetalae View MSA
122796133 5272 Eudicot View MSA
122042679 5273 Angiosperm View MSA
121309999 5274 Embryophyte View MSA
123347608 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0834182 0.0 0.339829 Low Low
cufflinks 2.15496 0.0 7.46474    
cufflinks 21.9733 0.0 58.9234 High High
cufflinks 0.622652 0.0 2.33382    
cufflinks 1.22768 0.0 4.43933    
cufflinks 5.39285 0.0 16.6288    
cufflinks 0.365996 0.0 1.40588    
cufflinks 0.926117 0.0 3.40164    
cufflinks 4.89439 0.0 15.28    
cufflinks 0.463       Low
cufflinks 5.105       High
cufflinks 5.077       High
cufflinks 2.341        
cufflinks 0.542       Low
cufflinks 1.08        
cufflinks 1.313        
cufflinks 4.689        
cufflinks 0.913        
cufflinks 0.76        
cufflinks 0.502       Low
cufflinks 8.243     High High
cufflinks 0.633        
cufflinks 0.523       Low
cufflinks 5.404       High
cufflinks 1.221        
cufflinks 7.491     High High

0 Strain