Gene : Glyma.01G177300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12300:SF47 - HVA22-LIKE PROTEIN K Genomic Order:  1773
Name:  ? Glyma.01G177300 Secondary Identifier:  ? PAC:30544093
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G177300 0.5kb upstream 0.5kb upstream 4622 true Chr01: 51372836-51377457 Glycine max
Glyma.01G177300 0.5kb upstream 0.5kb upstream 500 false Chr01: 51372836-51373335 Glycine max
Glyma.01G177300 0.5kb downstream 0.5kb downstream 4622 true Chr01: 51373336-51377957 Glycine max
Glyma.01G177300 0.5kb downstream 0.5kb downstream 500 false Chr01: 51377458-51377957 Glycine max
Glyma.01G177300 1.0kb upstream 1.0kb upstream 5122 true Chr01: 51372336-51377457 Glycine max
Glyma.01G177300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 51372336-51373335 Glycine max
Glyma.01G177300 1.0kb downstream 1.0kb downstream 5122 true Chr01: 51373336-51378457 Glycine max
Glyma.01G177300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 51377458-51378457 Glycine max
Glyma.01G177300 2.0kb upstream 2.0kb upstream 6122 true Chr01: 51371336-51377457 Glycine max
Glyma.01G177300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 51371336-51373335 Glycine max
Glyma.01G177300 2.0kb downstream 2.0kb downstream 6122 true Chr01: 51373336-51379457 Glycine max
Glyma.01G177300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 51377458-51379457 Glycine max
Glyma.01G177300 5.0kb upstream 5.0kb upstream 9122 true Chr01: 51368336-51377457 Glycine max
Glyma.01G177300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 51368336-51373335 Glycine max
Glyma.01G177300 5.0kb downstream 5.0kb downstream 9122 true Chr01: 51373336-51382457 Glycine max
Glyma.01G177300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 51377458-51382457 Glycine max
Glyma.01G177300 10.0kb upstream 10.0kb upstream 14122 true Chr01: 51363336-51377457 Glycine max
Glyma.01G177300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 51363336-51373335 Glycine max
Glyma.01G177300 10.0kb downstream 10.0kb downstream 14122 true Chr01: 51373336-51387457 Glycine max
Glyma.01G177300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 51377458-51387457 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307036 5265 Fabidae View MSA
124070048 5270 Rosid View MSA
123739293 5271 Pentapetalae View MSA
122793749 5272 Eudicot View MSA
122049785 5273 Angiosperm View MSA
121348295 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.7346 0.0 55.6274   Low
cufflinks 14.8404 0.0 57.7982    
cufflinks 17.7553 0.0 56.3793    
cufflinks 16.6077 0.0 53.5639    
cufflinks 15.1587 0.0 49.8639    
cufflinks 20.8027 0.0 76.2415   High
cufflinks 19.118 0.0 60.4434    
cufflinks 21.892 0.0 67.3849 High High
cufflinks 15.2081 0.0 50.0964    
cufflinks 1.403       High
cufflinks 0.913        
cufflinks 1.25        
cufflinks 1.36       High
cufflinks 1.353       High
cufflinks 0.665       Low
cufflinks 0.852        
cufflinks 0.941        
cufflinks 1.574       High
cufflinks 1.214        
cufflinks 0.92        
cufflinks 0.759       Low
cufflinks 0.923        
cufflinks 1.181        
cufflinks 1.009        
cufflinks 0.883        
cufflinks 0.778       Low

0 Strain