Gene : Glyma.01G175500 G. max Wm82.a2.v1

Defline:  (1 of 4) PTHR24286:SF37 - CYTOCHROME P450 708A2-RELATED Genomic Order:  1755
Name:  ? Glyma.01G175500 Secondary Identifier:  ? PAC:30542313

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G175500 0.5kb upstream 0.5kb upstream 5768 true Chr01: 51219181-51224948 Glycine max
Glyma.01G175500 0.5kb upstream 0.5kb upstream 500 false Chr01: 51219181-51219680 Glycine max
Glyma.01G175500 0.5kb downstream 0.5kb downstream 5768 true Chr01: 51219681-51225448 Glycine max
Glyma.01G175500 0.5kb downstream 0.5kb downstream 500 false Chr01: 51224949-51225448 Glycine max
Glyma.01G175500 1.0kb upstream 1.0kb upstream 6268 true Chr01: 51218681-51224948 Glycine max
Glyma.01G175500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 51218681-51219680 Glycine max
Glyma.01G175500 1.0kb downstream 1.0kb downstream 6268 true Chr01: 51219681-51225948 Glycine max
Glyma.01G175500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 51224949-51225948 Glycine max
Glyma.01G175500 2.0kb upstream 2.0kb upstream 7268 true Chr01: 51217681-51224948 Glycine max
Glyma.01G175500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 51217681-51219680 Glycine max
Glyma.01G175500 2.0kb downstream 2.0kb downstream 7268 true Chr01: 51219681-51226948 Glycine max
Glyma.01G175500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 51224949-51226948 Glycine max
Glyma.01G175500 5.0kb upstream 5.0kb upstream 10268 true Chr01: 51214681-51224948 Glycine max
Glyma.01G175500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 51214681-51219680 Glycine max
Glyma.01G175500 5.0kb downstream 5.0kb downstream 10268 true Chr01: 51219681-51229948 Glycine max
Glyma.01G175500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 51224949-51229948 Glycine max
Glyma.01G175500 10.0kb upstream 10.0kb upstream 15268 true Chr01: 51209681-51224948 Glycine max
Glyma.01G175500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 51209681-51219680 Glycine max
Glyma.01G175500 10.0kb downstream 10.0kb downstream 15268 true Chr01: 51219681-51234948 Glycine max
Glyma.01G175500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 51224949-51234948 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307354 5265 Fabidae View MSA
124067565 5270 Rosid View MSA
123746700 5271 Pentapetalae View MSA
122794993 5272 Eudicot View MSA
122051653 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121351760 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.45679 0.0 8.52997    
cufflinks 5.10633 0.0 22.1271   High
cufflinks 13.7569 0.0 51.8799   High
cufflinks 0.535332 0.0 3.29839    
cufflinks 1.1507 0.0 7.26381    
cufflinks 0.408442 0.0 1.92159   Low
cufflinks 0.467741 0.0 2.8867    
cufflinks 1.4421 0.0 5.32421    
cufflinks 1.00092 0.0 6.53761    
cufflinks 0.435        
cufflinks 0.099        
cufflinks 0.86        
cufflinks 0.46        
cufflinks 0.299        
cufflinks 0.005     Low Low
cufflinks 4.639       High
cufflinks 0.171        
cufflinks 0.345        
cufflinks 1.319        
cufflinks 6.734       High
cufflinks 0.148        
cufflinks 4.379       High
cufflinks 1.658        
cufflinks 0.188        
cufflinks 4.21       High
cufflinks 0.261        

0 Strain