Gene : Glyma.18G256000 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  2560
Name:  ? Glyma.18G256000 Secondary Identifier:  ? PAC:30557774
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G256000 0.5kb upstream 0.5kb upstream 3424 true Chr18: 54212217-54215640 Glycine max
Glyma.18G256000 0.5kb upstream 0.5kb upstream 500 false Chr18: 54212217-54212716 Glycine max
Glyma.18G256000 0.5kb downstream 0.5kb downstream 3424 true Chr18: 54212717-54216140 Glycine max
Glyma.18G256000 0.5kb downstream 0.5kb downstream 500 false Chr18: 54215641-54216140 Glycine max
Glyma.18G256000 1.0kb upstream 1.0kb upstream 3924 true Chr18: 54211717-54215640 Glycine max
Glyma.18G256000 1.0kb upstream 1.0kb upstream 1000 false Chr18: 54211717-54212716 Glycine max
Glyma.18G256000 1.0kb downstream 1.0kb downstream 3924 true Chr18: 54212717-54216640 Glycine max
Glyma.18G256000 1.0kb downstream 1.0kb downstream 1000 false Chr18: 54215641-54216640 Glycine max
Glyma.18G256000 2.0kb upstream 2.0kb upstream 4924 true Chr18: 54210717-54215640 Glycine max
Glyma.18G256000 2.0kb upstream 2.0kb upstream 2000 false Chr18: 54210717-54212716 Glycine max
Glyma.18G256000 2.0kb downstream 2.0kb downstream 4924 true Chr18: 54212717-54217640 Glycine max
Glyma.18G256000 2.0kb downstream 2.0kb downstream 2000 false Chr18: 54215641-54217640 Glycine max
Glyma.18G256000 5.0kb upstream 5.0kb upstream 7924 true Chr18: 54207717-54215640 Glycine max
Glyma.18G256000 5.0kb upstream 5.0kb upstream 5000 false Chr18: 54207717-54212716 Glycine max
Glyma.18G256000 5.0kb downstream 5.0kb downstream 7924 true Chr18: 54212717-54220640 Glycine max
Glyma.18G256000 5.0kb downstream 5.0kb downstream 5000 false Chr18: 54215641-54220640 Glycine max
Glyma.18G256000 10.0kb upstream 10.0kb upstream 12924 true Chr18: 54202717-54215640 Glycine max
Glyma.18G256000 10.0kb upstream 10.0kb upstream 10000 false Chr18: 54202717-54212716 Glycine max
Glyma.18G256000 10.0kb downstream 10.0kb downstream 12924 true Chr18: 54212717-54225640 Glycine max
Glyma.18G256000 10.0kb downstream 10.0kb downstream 10000 false Chr18: 54215641-54225640 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311178 5265 Fabidae View MSA
124070741 5270 Rosid View MSA
123749624 5271 Pentapetalae View MSA
122795805 5272 Eudicot View MSA
122048142 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121350345 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.130711 0.0 0.508601 Low  
cufflinks 0.200392 0.0 0.764624 Low  
cufflinks 0.0718486 0.0 0.285142 Low  
cufflinks 0.189327 0.0 0.723671    
cufflinks 1.33422 0.0 4.50397    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0384566 0.0 0.156728 Low Low
cufflinks 8.74677 0.0 23.6373   High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low  
cufflinks 0.035     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 15.377     High High
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.139        
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.058     Low  
cufflinks 0.037     Low  
cufflinks 0.007     Low  
cufflinks 0.031     Low  
cufflinks 0.019     Low  

0 Strain