Gene : Glyma.01G106600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10516:SF268 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE PASTICCINO1 Genomic Order:  1066
Name:  ? Glyma.01G106600 Secondary Identifier:  ? PAC:30542956
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G106600 0.5kb upstream 0.5kb upstream 10865 true Chr01: 36199798-36210662 Glycine max
Glyma.01G106600 0.5kb upstream 0.5kb upstream 500 false Chr01: 36199798-36200297 Glycine max
Glyma.01G106600 0.5kb downstream 0.5kb downstream 10865 true Chr01: 36200298-36211162 Glycine max
Glyma.01G106600 0.5kb downstream 0.5kb downstream 500 false Chr01: 36210663-36211162 Glycine max
Glyma.01G106600 1.0kb upstream 1.0kb upstream 11365 true Chr01: 36199298-36210662 Glycine max
Glyma.01G106600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 36199298-36200297 Glycine max
Glyma.01G106600 1.0kb downstream 1.0kb downstream 11365 true Chr01: 36200298-36211662 Glycine max
Glyma.01G106600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 36210663-36211662 Glycine max
Glyma.01G106600 2.0kb upstream 2.0kb upstream 12365 true Chr01: 36198298-36210662 Glycine max
Glyma.01G106600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 36198298-36200297 Glycine max
Glyma.01G106600 2.0kb downstream 2.0kb downstream 12365 true Chr01: 36200298-36212662 Glycine max
Glyma.01G106600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 36210663-36212662 Glycine max
Glyma.01G106600 5.0kb upstream 5.0kb upstream 15365 true Chr01: 36195298-36210662 Glycine max
Glyma.01G106600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 36195298-36200297 Glycine max
Glyma.01G106600 5.0kb downstream 5.0kb downstream 15365 true Chr01: 36200298-36215662 Glycine max
Glyma.01G106600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 36210663-36215662 Glycine max
Glyma.01G106600 10.0kb upstream 10.0kb upstream 20365 true Chr01: 36190298-36210662 Glycine max
Glyma.01G106600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 36190298-36200297 Glycine max
Glyma.01G106600 10.0kb downstream 10.0kb downstream 20365 true Chr01: 36200298-36220662 Glycine max
Glyma.01G106600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 36210663-36220662 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307968 5265 Fabidae View MSA
124061046 5270 Rosid View MSA
123741397 5271 Pentapetalae View MSA
122792989 5272 Eudicot View MSA
122041915 5273 Angiosperm View MSA
121346304 5274 Embryophyte View MSA
123424056 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.39942 0.0 12.1529    
cufflinks 7.21401 0.0 19.3582   High
cufflinks 3.5467 0.0 9.96454   Low
cufflinks 6.41419 0.0 17.2782    
cufflinks 4.60067 0.0 12.6703    
cufflinks 7.07333 0.0 18.9872   High
cufflinks 5.72533 0.0 15.5387    
cufflinks 5.24327 0.0 14.2895    
cufflinks 4.92257 0.0 13.4794    
cufflinks 1.619        
cufflinks 0.638       Low
cufflinks 2.017        
cufflinks 1.507        
cufflinks 1.493        
cufflinks 1.096        
cufflinks 1.947        
cufflinks 1.443        
cufflinks 3.205       High
cufflinks 3.063       High
cufflinks 2.024        
cufflinks 0.834       Low
cufflinks 2.006        
cufflinks 2.209        
cufflinks 0.945       Low
cufflinks 1.859        
cufflinks 1.223        

0 Strain