Gene : Glyma.18G256200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11028 - VACUOLAR ATP SYNTHASE SUBUNIT AC39 Genomic Order:  2562
Name:  ? Glyma.18G256200 Secondary Identifier:  ? PAC:30556260
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G256200 0.5kb upstream 0.5kb upstream 5234 true Chr18: 54222005-54227238 Glycine max
Glyma.18G256200 0.5kb upstream 0.5kb upstream 500 false Chr18: 54226739-54227238 Glycine max
Glyma.18G256200 0.5kb downstream 0.5kb downstream 5234 true Chr18: 54221505-54226738 Glycine max
Glyma.18G256200 0.5kb downstream 0.5kb downstream 500 false Chr18: 54221505-54222004 Glycine max
Glyma.18G256200 1.0kb upstream 1.0kb upstream 5734 true Chr18: 54222005-54227738 Glycine max
Glyma.18G256200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 54226739-54227738 Glycine max
Glyma.18G256200 1.0kb downstream 1.0kb downstream 5734 true Chr18: 54221005-54226738 Glycine max
Glyma.18G256200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 54221005-54222004 Glycine max
Glyma.18G256200 2.0kb upstream 2.0kb upstream 6734 true Chr18: 54222005-54228738 Glycine max
Glyma.18G256200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 54226739-54228738 Glycine max
Glyma.18G256200 2.0kb downstream 2.0kb downstream 6734 true Chr18: 54220005-54226738 Glycine max
Glyma.18G256200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 54220005-54222004 Glycine max
Glyma.18G256200 5.0kb upstream 5.0kb upstream 9734 true Chr18: 54222005-54231738 Glycine max
Glyma.18G256200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 54226739-54231738 Glycine max
Glyma.18G256200 5.0kb downstream 5.0kb downstream 9734 true Chr18: 54217005-54226738 Glycine max
Glyma.18G256200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 54217005-54222004 Glycine max
Glyma.18G256200 10.0kb upstream 10.0kb upstream 14734 true Chr18: 54222005-54236738 Glycine max
Glyma.18G256200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 54226739-54236738 Glycine max
Glyma.18G256200 10.0kb downstream 10.0kb downstream 14734 true Chr18: 54212005-54226738 Glycine max
Glyma.18G256200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 54212005-54222004 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301591 5265 Fabidae View MSA
124065072 5270 Rosid View MSA
123742149 5271 Pentapetalae View MSA
122786040 5272 Eudicot View MSA
122045239 5273 Angiosperm View MSA
121345158 5274 Embryophyte View MSA
123427776 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.6585 0.0 68.5165 High  
cufflinks 22.1228 0.0 59.0213 High Low
cufflinks 19.6538 0.0 52.4661   Low
cufflinks 27.6093 0.0 73.8288 High  
cufflinks 32.4288 0.0 87.1282 High High
cufflinks 31.6943 0.0 85.1098 High  
cufflinks 27.4875 0.0 73.4617 High  
cufflinks 32.1751 0.0 86.4482 High High
cufflinks 25.2458 0.0 67.4093 High  
cufflinks 13.337     High High
cufflinks 5.532     High  
cufflinks 6.053        
cufflinks 11.074     High High
cufflinks 12.431     High High
cufflinks 5.729     High  
cufflinks 7.268     High  
cufflinks 4.547       Low
cufflinks 8.381     High  
cufflinks 7.451     High  
cufflinks 6.375        
cufflinks 6.994     High  
cufflinks 6.618        
cufflinks 6.07        
cufflinks 6.724     High  
cufflinks 6.622        
cufflinks 6.74     High  

0 Strain