Gene : Glyma.18G257900 G. max Wm82.a2.v1
Defline:  (1 of 12) PF06974 - Protein of unknown function (DUF1298) (DUF1298) Genomic Order:  2579
Name:  ? Glyma.18G257900 Secondary Identifier:  ? PAC:30557003
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G257900 0.5kb upstream 0.5kb upstream 3817 true Chr18: 54351177-54354993 Glycine max
Glyma.18G257900 0.5kb upstream 0.5kb upstream 500 false Chr18: 54354494-54354993 Glycine max
Glyma.18G257900 0.5kb downstream 0.5kb downstream 3817 true Chr18: 54350677-54354493 Glycine max
Glyma.18G257900 0.5kb downstream 0.5kb downstream 500 false Chr18: 54350677-54351176 Glycine max
Glyma.18G257900 1.0kb upstream 1.0kb upstream 4317 true Chr18: 54351177-54355493 Glycine max
Glyma.18G257900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 54354494-54355493 Glycine max
Glyma.18G257900 1.0kb downstream 1.0kb downstream 4317 true Chr18: 54350177-54354493 Glycine max
Glyma.18G257900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 54350177-54351176 Glycine max
Glyma.18G257900 2.0kb upstream 2.0kb upstream 5317 true Chr18: 54351177-54356493 Glycine max
Glyma.18G257900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 54354494-54356493 Glycine max
Glyma.18G257900 2.0kb downstream 2.0kb downstream 5317 true Chr18: 54349177-54354493 Glycine max
Glyma.18G257900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 54349177-54351176 Glycine max
Glyma.18G257900 5.0kb upstream 5.0kb upstream 8317 true Chr18: 54351177-54359493 Glycine max
Glyma.18G257900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 54354494-54359493 Glycine max
Glyma.18G257900 5.0kb downstream 5.0kb downstream 8317 true Chr18: 54346177-54354493 Glycine max
Glyma.18G257900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 54346177-54351176 Glycine max
Glyma.18G257900 10.0kb upstream 10.0kb upstream 13317 true Chr18: 54351177-54364493 Glycine max
Glyma.18G257900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 54354494-54364493 Glycine max
Glyma.18G257900 10.0kb downstream 10.0kb downstream 13317 true Chr18: 54341177-54354493 Glycine max
Glyma.18G257900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 54341177-54351176 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313899 5265 Fabidae View MSA
124072323 5270 Rosid View MSA
123749190 5271 Pentapetalae View MSA
122797420 5272 Eudicot View MSA
122048260 5273 Angiosperm View MSA
123428993 5275 Viridiplantae View MSA
121310908 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.30112 0.0 7.43552   High
cufflinks 0.0119058 0.0 0.0539933 Low Low
cufflinks 0.757985 0.0 2.7275    
cufflinks 0.0199789 0.0 0.0865402 Low Low
cufflinks 0.544599 0.0 2.00613    
cufflinks 2.2099 0.0 7.18496    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.287151 0.0 1.08829    
cufflinks 0.585501 0.0 2.14461    
cufflinks 0.179        
cufflinks 0.314        
cufflinks 0.252        
cufflinks 0.04     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.283        
cufflinks 0.054     Low Low
cufflinks 0.852       High
cufflinks 0.067     Low Low
cufflinks 0.139        
cufflinks 0.121        
cufflinks 1.482       High
cufflinks 0.107        
cufflinks 0.491        
cufflinks 0.35        
cufflinks 0.123        
cufflinks 1.011       High

0 Strain