Gene : Glyma.01G115800 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR13683//PTHR13683:SF309 - ASPARTYL PROTEASES Genomic Order:  1158
Name:  ? Glyma.01G115800 Secondary Identifier:  ? PAC:30542153
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G115800 0.5kb upstream 0.5kb upstream 2450 true Chr01: 40067786-40070235 Glycine max
Glyma.01G115800 0.5kb upstream 0.5kb upstream 500 false Chr01: 40067786-40068285 Glycine max
Glyma.01G115800 0.5kb downstream 0.5kb downstream 2450 true Chr01: 40068286-40070735 Glycine max
Glyma.01G115800 0.5kb downstream 0.5kb downstream 500 false Chr01: 40070236-40070735 Glycine max
Glyma.01G115800 1.0kb upstream 1.0kb upstream 2950 true Chr01: 40067286-40070235 Glycine max
Glyma.01G115800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 40067286-40068285 Glycine max
Glyma.01G115800 1.0kb downstream 1.0kb downstream 2950 true Chr01: 40068286-40071235 Glycine max
Glyma.01G115800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 40070236-40071235 Glycine max
Glyma.01G115800 2.0kb upstream 2.0kb upstream 3950 true Chr01: 40066286-40070235 Glycine max
Glyma.01G115800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 40066286-40068285 Glycine max
Glyma.01G115800 2.0kb downstream 2.0kb downstream 3950 true Chr01: 40068286-40072235 Glycine max
Glyma.01G115800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 40070236-40072235 Glycine max
Glyma.01G115800 5.0kb upstream 5.0kb upstream 6950 true Chr01: 40063286-40070235 Glycine max
Glyma.01G115800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 40063286-40068285 Glycine max
Glyma.01G115800 5.0kb downstream 5.0kb downstream 6950 true Chr01: 40068286-40075235 Glycine max
Glyma.01G115800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 40070236-40075235 Glycine max
Glyma.01G115800 10.0kb upstream 10.0kb upstream 11950 true Chr01: 40058286-40070235 Glycine max
Glyma.01G115800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 40058286-40068285 Glycine max
Glyma.01G115800 10.0kb downstream 10.0kb downstream 11950 true Chr01: 40068286-40080235 Glycine max
Glyma.01G115800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 40070236-40080235 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121658377 5273 Angiosperm View MSA
122250657 5265 Fabidae View MSA
124042085 5270 Rosid View MSA
123612570 5271 Pentapetalae View MSA
122647065 5272 Eudicot View MSA
120930362 5274 Embryophyte View MSA
122970869 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0314097 0.0 0.142444 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low Low
cufflinks 0.0     Not Expressed Not Expressed

0 Strain