Gene : Glyma.01G121300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR24078:SF298 - HEAT SHOCK PROTEIN 40-LIKE Genomic Order:  1213
Name:  ? Glyma.01G121300 Secondary Identifier:  ? PAC:30544951
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G121300 0.5kb upstream 0.5kb upstream 5298 true Chr01: 41795455-41800752 Glycine max
Glyma.01G121300 0.5kb upstream 0.5kb upstream 500 false Chr01: 41800253-41800752 Glycine max
Glyma.01G121300 0.5kb downstream 0.5kb downstream 5298 true Chr01: 41794955-41800252 Glycine max
Glyma.01G121300 0.5kb downstream 0.5kb downstream 500 false Chr01: 41794955-41795454 Glycine max
Glyma.01G121300 1.0kb upstream 1.0kb upstream 5798 true Chr01: 41795455-41801252 Glycine max
Glyma.01G121300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 41800253-41801252 Glycine max
Glyma.01G121300 1.0kb downstream 1.0kb downstream 5798 true Chr01: 41794455-41800252 Glycine max
Glyma.01G121300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 41794455-41795454 Glycine max
Glyma.01G121300 2.0kb upstream 2.0kb upstream 6798 true Chr01: 41795455-41802252 Glycine max
Glyma.01G121300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 41800253-41802252 Glycine max
Glyma.01G121300 2.0kb downstream 2.0kb downstream 6798 true Chr01: 41793455-41800252 Glycine max
Glyma.01G121300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 41793455-41795454 Glycine max
Glyma.01G121300 5.0kb upstream 5.0kb upstream 9798 true Chr01: 41795455-41805252 Glycine max
Glyma.01G121300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 41800253-41805252 Glycine max
Glyma.01G121300 5.0kb downstream 5.0kb downstream 9798 true Chr01: 41790455-41800252 Glycine max
Glyma.01G121300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 41790455-41795454 Glycine max
Glyma.01G121300 10.0kb upstream 10.0kb upstream 14798 true Chr01: 41795455-41810252 Glycine max
Glyma.01G121300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 41800253-41810252 Glycine max
Glyma.01G121300 10.0kb downstream 10.0kb downstream 14798 true Chr01: 41785455-41800252 Glycine max
Glyma.01G121300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 41785455-41795454 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309230 5265 Fabidae View MSA
124067139 5270 Rosid View MSA
123747669 5271 Pentapetalae View MSA
122796849 5272 Eudicot View MSA
122043533 5273 Angiosperm View MSA
123429128 5275 Viridiplantae View MSA
121350390 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.08335 0.0 12.2561   Low
cufflinks 6.87266 0.0 19.3681    
cufflinks 4.80524 0.0 14.1141    
cufflinks 5.47764 0.0 15.8082    
cufflinks 5.33996 0.0 15.4577    
cufflinks 16.6383 0.0 44.4305   High
cufflinks 5.92713 0.0 16.9718    
cufflinks 7.42822 0.0 20.7505    
cufflinks 6.33018 0.0 17.981    
cufflinks 3.078       High
cufflinks 1.595       Low
cufflinks 2.203        
cufflinks 2.84        
cufflinks 2.32        
cufflinks 1.341       Low
cufflinks 2.829        
cufflinks 2.082        
cufflinks 3.044        
cufflinks 2.402        
cufflinks 3.209       High
cufflinks 1.455       Low
cufflinks 2.964        
cufflinks 2.574        
cufflinks 1.983        
cufflinks 2.972        
cufflinks 2.128        

0 Strain