Gene : Glyma.18G259400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23201:SF21 - GIBBERELLIN-REGULATED PROTEIN 4 Genomic Order:  2594
Name:  ? Glyma.18G259400 Secondary Identifier:  ? PAC:30557303
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G259400 0.5kb upstream 0.5kb upstream 2359 true Chr18: 54518223-54520581 Glycine max
Glyma.18G259400 0.5kb upstream 0.5kb upstream 500 false Chr18: 54518223-54518722 Glycine max
Glyma.18G259400 0.5kb downstream 0.5kb downstream 2359 true Chr18: 54518723-54521081 Glycine max
Glyma.18G259400 0.5kb downstream 0.5kb downstream 500 false Chr18: 54520582-54521081 Glycine max
Glyma.18G259400 1.0kb upstream 1.0kb upstream 2859 true Chr18: 54517723-54520581 Glycine max
Glyma.18G259400 1.0kb upstream 1.0kb upstream 1000 false Chr18: 54517723-54518722 Glycine max
Glyma.18G259400 1.0kb downstream 1.0kb downstream 2859 true Chr18: 54518723-54521581 Glycine max
Glyma.18G259400 1.0kb downstream 1.0kb downstream 1000 false Chr18: 54520582-54521581 Glycine max
Glyma.18G259400 2.0kb upstream 2.0kb upstream 3859 true Chr18: 54516723-54520581 Glycine max
Glyma.18G259400 2.0kb upstream 2.0kb upstream 2000 false Chr18: 54516723-54518722 Glycine max
Glyma.18G259400 2.0kb downstream 2.0kb downstream 3859 true Chr18: 54518723-54522581 Glycine max
Glyma.18G259400 2.0kb downstream 2.0kb downstream 2000 false Chr18: 54520582-54522581 Glycine max
Glyma.18G259400 5.0kb upstream 5.0kb upstream 6859 true Chr18: 54513723-54520581 Glycine max
Glyma.18G259400 5.0kb upstream 5.0kb upstream 5000 false Chr18: 54513723-54518722 Glycine max
Glyma.18G259400 5.0kb downstream 5.0kb downstream 6859 true Chr18: 54518723-54525581 Glycine max
Glyma.18G259400 5.0kb downstream 5.0kb downstream 5000 false Chr18: 54520582-54525581 Glycine max
Glyma.18G259400 10.0kb upstream 10.0kb upstream 11859 true Chr18: 54508723-54520581 Glycine max
Glyma.18G259400 10.0kb upstream 10.0kb upstream 10000 false Chr18: 54508723-54518722 Glycine max
Glyma.18G259400 10.0kb downstream 10.0kb downstream 11859 true Chr18: 54518723-54530581 Glycine max
Glyma.18G259400 10.0kb downstream 10.0kb downstream 10000 false Chr18: 54520582-54530581 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309211 5265 Fabidae View MSA
124069582 5270 Rosid View MSA
123752288 5271 Pentapetalae View MSA
122795520 5272 Eudicot View MSA
122051034 5273 Angiosperm View MSA
121312257 5274 Embryophyte View MSA
123349447 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.50584 0.0 5.54197   Low
cufflinks 366.017 0.0 1207.93 High  
cufflinks 142.432 0.0 404.224 High  
cufflinks 47.5875 0.0 126.969 High  
cufflinks 931.834 0.0 3994.09 High High
cufflinks 376.771 0.0 1254.9 High  
cufflinks 65.4671 0.0 175.396 High  
cufflinks 302.224 0.0 963.779 High  
cufflinks 205.091 0.0 611.129 High  
cufflinks 47.36     High  
cufflinks 2.964       Low
cufflinks 73.554     High  
cufflinks 106.272     High  
cufflinks 218.097     High High
cufflinks 0.342       Low
cufflinks 42.905     High  
cufflinks 9.751     High  
cufflinks 444.641     High High
cufflinks 42.753     High  
cufflinks 60.335     High  
cufflinks 9.767     High  
cufflinks 59.936     High  
cufflinks 60.12     High  
cufflinks 1.279       Low
cufflinks 50.235     High  
cufflinks 14.431     High  

0 Strain