Gene : Glyma.18G259600 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR22950:SF280 - TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN Genomic Order:  2596
Name:  ? Glyma.18G259600 Secondary Identifier:  ? PAC:30556165
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G259600 0.5kb upstream 0.5kb upstream 2243 true Chr18: 54571586-54573828 Glycine max
Glyma.18G259600 0.5kb upstream 0.5kb upstream 500 false Chr18: 54571586-54572085 Glycine max
Glyma.18G259600 0.5kb downstream 0.5kb downstream 2243 true Chr18: 54572086-54574328 Glycine max
Glyma.18G259600 0.5kb downstream 0.5kb downstream 500 false Chr18: 54573829-54574328 Glycine max
Glyma.18G259600 1.0kb upstream 1.0kb upstream 2743 true Chr18: 54571086-54573828 Glycine max
Glyma.18G259600 1.0kb upstream 1.0kb upstream 1000 false Chr18: 54571086-54572085 Glycine max
Glyma.18G259600 1.0kb downstream 1.0kb downstream 2743 true Chr18: 54572086-54574828 Glycine max
Glyma.18G259600 1.0kb downstream 1.0kb downstream 1000 false Chr18: 54573829-54574828 Glycine max
Glyma.18G259600 2.0kb upstream 2.0kb upstream 3743 true Chr18: 54570086-54573828 Glycine max
Glyma.18G259600 2.0kb upstream 2.0kb upstream 2000 false Chr18: 54570086-54572085 Glycine max
Glyma.18G259600 2.0kb downstream 2.0kb downstream 3743 true Chr18: 54572086-54575828 Glycine max
Glyma.18G259600 2.0kb downstream 2.0kb downstream 2000 false Chr18: 54573829-54575828 Glycine max
Glyma.18G259600 5.0kb upstream 5.0kb upstream 6743 true Chr18: 54567086-54573828 Glycine max
Glyma.18G259600 5.0kb upstream 5.0kb upstream 5000 false Chr18: 54567086-54572085 Glycine max
Glyma.18G259600 5.0kb downstream 5.0kb downstream 6743 true Chr18: 54572086-54578828 Glycine max
Glyma.18G259600 5.0kb downstream 5.0kb downstream 5000 false Chr18: 54573829-54578828 Glycine max
Glyma.18G259600 10.0kb upstream 10.0kb upstream 11743 true Chr18: 54562086-54573828 Glycine max
Glyma.18G259600 10.0kb upstream 10.0kb upstream 10000 false Chr18: 54562086-54572085 Glycine max
Glyma.18G259600 10.0kb downstream 10.0kb downstream 11743 true Chr18: 54572086-54583828 Glycine max
Glyma.18G259600 10.0kb downstream 10.0kb downstream 10000 false Chr18: 54573829-54583828 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041365 5273 Angiosperm View MSA
122311679 5265 Fabidae View MSA
124072696 5270 Rosid View MSA
123745123 5271 Pentapetalae View MSA
122792939 5272 Eudicot View MSA
123429000 5275 Viridiplantae View MSA
121349038 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0396855 0.0 0.169119 Low  
cufflinks 0.0374496 0.0 0.159959 Low  
cufflinks 0.0818823 0.0 0.331948 Low High
cufflinks 0.0209949 0.0 0.0942091 Low  
cufflinks 0.0168196 0.0 0.077272 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0189723 0.0 0.0858678 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.209        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.233        
cufflinks 0.019     Low Low
cufflinks 0.007     Low Low
cufflinks 0.01     Low Low
cufflinks 0.57        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.998        
cufflinks 0.268        
cufflinks 0.374        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.566        
cufflinks 1.708       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.752        
cufflinks 0.01     Low Low

0 Strain