Gene : Glyma.01G128200 G. max Wm82.a2.v1
Defline:  (1 of 74) KOG1947 - Leucine rich repeat proteins, some proteins contain F-box Genomic Order:  1282
Name:  ? Glyma.01G128200 Secondary Identifier:  ? PAC:30543181
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G128200 0.5kb upstream 0.5kb upstream 5949 true Chr01: 44038519-44044467 Glycine max
Glyma.01G128200 0.5kb upstream 0.5kb upstream 500 false Chr01: 44043968-44044467 Glycine max
Glyma.01G128200 0.5kb downstream 0.5kb downstream 5949 true Chr01: 44038019-44043967 Glycine max
Glyma.01G128200 0.5kb downstream 0.5kb downstream 500 false Chr01: 44038019-44038518 Glycine max
Glyma.01G128200 1.0kb upstream 1.0kb upstream 6449 true Chr01: 44038519-44044967 Glycine max
Glyma.01G128200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 44043968-44044967 Glycine max
Glyma.01G128200 1.0kb downstream 1.0kb downstream 6449 true Chr01: 44037519-44043967 Glycine max
Glyma.01G128200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 44037519-44038518 Glycine max
Glyma.01G128200 2.0kb upstream 2.0kb upstream 7449 true Chr01: 44038519-44045967 Glycine max
Glyma.01G128200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 44043968-44045967 Glycine max
Glyma.01G128200 2.0kb downstream 2.0kb downstream 7449 true Chr01: 44036519-44043967 Glycine max
Glyma.01G128200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 44036519-44038518 Glycine max
Glyma.01G128200 5.0kb upstream 5.0kb upstream 10449 true Chr01: 44038519-44048967 Glycine max
Glyma.01G128200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 44043968-44048967 Glycine max
Glyma.01G128200 5.0kb downstream 5.0kb downstream 10449 true Chr01: 44033519-44043967 Glycine max
Glyma.01G128200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 44033519-44038518 Glycine max
Glyma.01G128200 10.0kb upstream 10.0kb upstream 15449 true Chr01: 44038519-44053967 Glycine max
Glyma.01G128200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 44043968-44053967 Glycine max
Glyma.01G128200 10.0kb downstream 10.0kb downstream 15449 true Chr01: 44028519-44043967 Glycine max
Glyma.01G128200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 44028519-44038518 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305920 5265 Fabidae View MSA
124071815 5270 Rosid View MSA
123740566 5271 Pentapetalae View MSA
122791928 5272 Eudicot View MSA
122041670 5273 Angiosperm View MSA
123428966 5275 Viridiplantae View MSA
121346747 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.2195 0.0 14.3003   High
cufflinks 3.41477 0.0 9.73788    
cufflinks 3.64043 0.0 10.2991    
cufflinks 5.62513 0.0 15.3333   High
cufflinks 3.62429 0.0 10.2559    
cufflinks 2.72397 0.0 7.97416    
cufflinks 1.77431 0.0 5.52889   Low
cufflinks 3.45049 0.0 9.83724    
cufflinks 5.04222 0.0 13.8405    
cufflinks 2.142       Low
cufflinks 18.825     High High
cufflinks 3.44        
cufflinks 2.73        
cufflinks 2.151       Low
cufflinks 13.435     High High
cufflinks 4.73        
cufflinks 4.112        
cufflinks 3.055        
cufflinks 3.513        
cufflinks 5.14        
cufflinks 12.155     High High
cufflinks 4.444        
cufflinks 3.979        
cufflinks 12.644     High High
cufflinks 4.918        
cufflinks 5.879        

0 Strain