Gene : Glyma.18G260200 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR12281 - RP42 RELATED Genomic Order:  2602
Name:  ? Glyma.18G260200 Secondary Identifier:  ? PAC:30558396
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G260200 0.5kb upstream 0.5kb upstream 6089 true Chr18: 54624746-54630834 Glycine max
Glyma.18G260200 0.5kb upstream 0.5kb upstream 500 false Chr18: 54630335-54630834 Glycine max
Glyma.18G260200 0.5kb downstream 0.5kb downstream 6089 true Chr18: 54624246-54630334 Glycine max
Glyma.18G260200 0.5kb downstream 0.5kb downstream 500 false Chr18: 54624246-54624745 Glycine max
Glyma.18G260200 1.0kb upstream 1.0kb upstream 6589 true Chr18: 54624746-54631334 Glycine max
Glyma.18G260200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 54630335-54631334 Glycine max
Glyma.18G260200 1.0kb downstream 1.0kb downstream 6589 true Chr18: 54623746-54630334 Glycine max
Glyma.18G260200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 54623746-54624745 Glycine max
Glyma.18G260200 2.0kb upstream 2.0kb upstream 7589 true Chr18: 54624746-54632334 Glycine max
Glyma.18G260200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 54630335-54632334 Glycine max
Glyma.18G260200 2.0kb downstream 2.0kb downstream 7589 true Chr18: 54622746-54630334 Glycine max
Glyma.18G260200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 54622746-54624745 Glycine max
Glyma.18G260200 5.0kb upstream 5.0kb upstream 10589 true Chr18: 54624746-54635334 Glycine max
Glyma.18G260200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 54630335-54635334 Glycine max
Glyma.18G260200 5.0kb downstream 5.0kb downstream 10589 true Chr18: 54619746-54630334 Glycine max
Glyma.18G260200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 54619746-54624745 Glycine max
Glyma.18G260200 10.0kb upstream 10.0kb upstream 15589 true Chr18: 54624746-54640334 Glycine max
Glyma.18G260200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 54630335-54640334 Glycine max
Glyma.18G260200 10.0kb downstream 10.0kb downstream 15589 true Chr18: 54614746-54630334 Glycine max
Glyma.18G260200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 54614746-54624745 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305244 5265 Fabidae View MSA
124067795 5270 Rosid View MSA
123739040 5271 Pentapetalae View MSA
122788388 5272 Eudicot View MSA
122049788 5273 Angiosperm View MSA
121347984 5274 Embryophyte View MSA
123426015 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.75899 0.0 22.9819    
cufflinks 6.61266 0.0 25.2152    
cufflinks 6.96909 0.0 25.8253    
cufflinks 6.66544 0.0 25.2214    
cufflinks 5.46779 0.0 22.3991    
cufflinks 3.45797 0.0 12.414   Low
cufflinks 6.49234 0.0 24.9395    
cufflinks 5.30324 0.0 21.9311    
cufflinks 5.69312 0.0 22.6858    
cufflinks 0.399       Low
cufflinks 0.726        
cufflinks 0.658        
cufflinks 0.496        
cufflinks 0.44       Low
cufflinks 0.582        
cufflinks 0.741        
cufflinks 0.324       Low
cufflinks 0.667        
cufflinks 0.601        
cufflinks 0.904       High
cufflinks 0.618        
cufflinks 0.781        
cufflinks 0.553        
cufflinks 0.812       High
cufflinks 0.826       High
cufflinks 0.411       Low

0 Strain