Gene : Glyma.18G260500 G. max Wm82.a2.v1
Defline:  (1 of 14) PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Genomic Order:  2605
Name:  ? Glyma.18G260500 Secondary Identifier:  ? PAC:30558764
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G260500 0.5kb upstream 0.5kb upstream 4701 true Chr18: 54644426-54649126 Glycine max
Glyma.18G260500 0.5kb upstream 0.5kb upstream 500 false Chr18: 54644426-54644925 Glycine max
Glyma.18G260500 0.5kb downstream 0.5kb downstream 4701 true Chr18: 54644926-54649626 Glycine max
Glyma.18G260500 0.5kb downstream 0.5kb downstream 500 false Chr18: 54649127-54649626 Glycine max
Glyma.18G260500 1.0kb upstream 1.0kb upstream 5201 true Chr18: 54643926-54649126 Glycine max
Glyma.18G260500 1.0kb upstream 1.0kb upstream 1000 false Chr18: 54643926-54644925 Glycine max
Glyma.18G260500 1.0kb downstream 1.0kb downstream 5201 true Chr18: 54644926-54650126 Glycine max
Glyma.18G260500 1.0kb downstream 1.0kb downstream 1000 false Chr18: 54649127-54650126 Glycine max
Glyma.18G260500 2.0kb upstream 2.0kb upstream 6201 true Chr18: 54642926-54649126 Glycine max
Glyma.18G260500 2.0kb upstream 2.0kb upstream 2000 false Chr18: 54642926-54644925 Glycine max
Glyma.18G260500 2.0kb downstream 2.0kb downstream 6201 true Chr18: 54644926-54651126 Glycine max
Glyma.18G260500 2.0kb downstream 2.0kb downstream 2000 false Chr18: 54649127-54651126 Glycine max
Glyma.18G260500 5.0kb upstream 5.0kb upstream 9201 true Chr18: 54639926-54649126 Glycine max
Glyma.18G260500 5.0kb upstream 5.0kb upstream 5000 false Chr18: 54639926-54644925 Glycine max
Glyma.18G260500 5.0kb downstream 5.0kb downstream 9201 true Chr18: 54644926-54654126 Glycine max
Glyma.18G260500 5.0kb downstream 5.0kb downstream 5000 false Chr18: 54649127-54654126 Glycine max
Glyma.18G260500 10.0kb upstream 10.0kb upstream 14201 true Chr18: 54634926-54649126 Glycine max
Glyma.18G260500 10.0kb upstream 10.0kb upstream 10000 false Chr18: 54634926-54644925 Glycine max
Glyma.18G260500 10.0kb downstream 10.0kb downstream 14201 true Chr18: 54644926-54659126 Glycine max
Glyma.18G260500 10.0kb downstream 10.0kb downstream 10000 false Chr18: 54649127-54659126 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304560 5265 Fabidae View MSA
124066324 5270 Rosid View MSA
123751425 5271 Pentapetalae View MSA
122791287 5272 Eudicot View MSA
122048139 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.09253 0.0 6.4967    
cufflinks 1.11938 0.0 3.78602    
cufflinks 0.55677 0.0 2.00081   Low
cufflinks 1.2468 0.0 4.15285    
cufflinks 2.57908 0.0 7.7699    
cufflinks 5.92274 0.0 16.2464   High
cufflinks 1.70518 0.0 5.45505    
cufflinks 1.40052 0.0 4.58702    
cufflinks 1.97355 0.0 6.17643    
cufflinks 0.809        
cufflinks 3.073        
cufflinks 0.187       Low
cufflinks 2.493        
cufflinks 1.244        
cufflinks 4.861       High
cufflinks 1.505        
cufflinks 1.931        
cufflinks 0.304       Low
cufflinks 2.222        
cufflinks 0.332       Low
cufflinks 2.989        
cufflinks 0.559        
cufflinks 0.859        
cufflinks 3.15        
cufflinks 0.81        
cufflinks 4.558       High

0 Strain