Gene : Glyma.01G133900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR15615:SF15 - CYCLIN-U2-1-RELATED Genomic Order:  1339
Name:  ? Glyma.01G133900 Secondary Identifier:  ? PAC:30543251
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G133900 0.5kb upstream 0.5kb upstream 2141 true Chr01: 45423977-45426117 Glycine max
Glyma.01G133900 0.5kb upstream 0.5kb upstream 500 false Chr01: 45423977-45424476 Glycine max
Glyma.01G133900 0.5kb downstream 0.5kb downstream 2141 true Chr01: 45424477-45426617 Glycine max
Glyma.01G133900 0.5kb downstream 0.5kb downstream 500 false Chr01: 45426118-45426617 Glycine max
Glyma.01G133900 1.0kb upstream 1.0kb upstream 2641 true Chr01: 45423477-45426117 Glycine max
Glyma.01G133900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 45423477-45424476 Glycine max
Glyma.01G133900 1.0kb downstream 1.0kb downstream 2641 true Chr01: 45424477-45427117 Glycine max
Glyma.01G133900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 45426118-45427117 Glycine max
Glyma.01G133900 2.0kb upstream 2.0kb upstream 3641 true Chr01: 45422477-45426117 Glycine max
Glyma.01G133900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 45422477-45424476 Glycine max
Glyma.01G133900 2.0kb downstream 2.0kb downstream 3641 true Chr01: 45424477-45428117 Glycine max
Glyma.01G133900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 45426118-45428117 Glycine max
Glyma.01G133900 5.0kb upstream 5.0kb upstream 6641 true Chr01: 45419477-45426117 Glycine max
Glyma.01G133900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 45419477-45424476 Glycine max
Glyma.01G133900 5.0kb downstream 5.0kb downstream 6641 true Chr01: 45424477-45431117 Glycine max
Glyma.01G133900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 45426118-45431117 Glycine max
Glyma.01G133900 10.0kb upstream 10.0kb upstream 11641 true Chr01: 45414477-45426117 Glycine max
Glyma.01G133900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 45414477-45424476 Glycine max
Glyma.01G133900 10.0kb downstream 10.0kb downstream 11641 true Chr01: 45424477-45436117 Glycine max
Glyma.01G133900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 45426118-45436117 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041371 5273 Angiosperm View MSA
122307612 5265 Fabidae View MSA
124067559 5270 Rosid View MSA
123748506 5271 Pentapetalae View MSA
122790350 5272 Eudicot View MSA
121349638 5274 Embryophyte View MSA
123428486 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.295426 0.0 1.14951   Low
cufflinks 3.336 0.0 11.089    
cufflinks 0.694484 0.0 2.59505   Low
cufflinks 3.47812 0.0 11.4915    
cufflinks 5.54781 0.0 17.2916    
cufflinks 6.79849 0.0 20.5204    
cufflinks 0.721755 0.0 2.70107   Low
cufflinks 6.45406 0.0 19.5335    
cufflinks 6.62939 0.0 20.035    
cufflinks 1.686        
cufflinks 0.721        
cufflinks 1.205        
cufflinks 6.977       High
cufflinks 4.148       High
cufflinks 1.006        
cufflinks 0.261        
cufflinks 0.598        
cufflinks 0.591        
cufflinks 3.322       High
cufflinks 0.087     Low Low
cufflinks 0.472        
cufflinks 0.373        
cufflinks 0.249        
cufflinks 0.469        
cufflinks 0.167       Low
cufflinks 1.082        

0 Strain