Gene : Glyma.18G260800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12418:SF33 - 1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE 1 Genomic Order:  2608
Name:  ? Glyma.18G260800 Secondary Identifier:  ? PAC:30557869
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5837 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G260800 0.5kb upstream 0.5kb upstream 3107 true Chr18: 54664069-54667175 Glycine max
Glyma.18G260800 0.5kb upstream 0.5kb upstream 500 false Chr18: 54666676-54667175 Glycine max
Glyma.18G260800 0.5kb downstream 0.5kb downstream 3107 true Chr18: 54663569-54666675 Glycine max
Glyma.18G260800 0.5kb downstream 0.5kb downstream 500 false Chr18: 54663569-54664068 Glycine max
Glyma.18G260800 1.0kb upstream 1.0kb upstream 3607 true Chr18: 54664069-54667675 Glycine max
Glyma.18G260800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 54666676-54667675 Glycine max
Glyma.18G260800 1.0kb downstream 1.0kb downstream 3607 true Chr18: 54663069-54666675 Glycine max
Glyma.18G260800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 54663069-54664068 Glycine max
Glyma.18G260800 2.0kb upstream 2.0kb upstream 4607 true Chr18: 54664069-54668675 Glycine max
Glyma.18G260800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 54666676-54668675 Glycine max
Glyma.18G260800 2.0kb downstream 2.0kb downstream 4607 true Chr18: 54662069-54666675 Glycine max
Glyma.18G260800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 54662069-54664068 Glycine max
Glyma.18G260800 5.0kb upstream 5.0kb upstream 7607 true Chr18: 54664069-54671675 Glycine max
Glyma.18G260800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 54666676-54671675 Glycine max
Glyma.18G260800 5.0kb downstream 5.0kb downstream 7607 true Chr18: 54659069-54666675 Glycine max
Glyma.18G260800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 54659069-54664068 Glycine max
Glyma.18G260800 10.0kb upstream 10.0kb upstream 12607 true Chr18: 54664069-54676675 Glycine max
Glyma.18G260800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 54666676-54676675 Glycine max
Glyma.18G260800 10.0kb downstream 10.0kb downstream 12607 true Chr18: 54654069-54666675 Glycine max
Glyma.18G260800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 54654069-54664068 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304116 5265 Fabidae View MSA
124067278 5270 Rosid View MSA
123738374 5271 Pentapetalae View MSA
122791322 5272 Eudicot View MSA
122042191 5273 Angiosperm View MSA
121348407 5274 Embryophyte View MSA
123380851 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.29062 0.0 16.7315    
cufflinks 6.52214 0.0 19.9931    
cufflinks 3.07807 0.0 10.4055   Low
cufflinks 9.37375 0.0 27.2892    
cufflinks 7.07822 0.0 21.4798    
cufflinks 7.6091 0.0 22.8598    
cufflinks 10.6723 0.0 30.6622   High
cufflinks 7.79886 0.0 23.2243    
cufflinks 10.0657 0.0 29.098    
cufflinks 2.175       High
cufflinks 0.672       Low
cufflinks 1.643        
cufflinks 2.683       High
cufflinks 0.915       Low
cufflinks 1.499        
cufflinks 1.426        
cufflinks 1.157        
cufflinks 1.505        
cufflinks 3.103       High
cufflinks 1.253        
cufflinks 0.828       Low
cufflinks 1.715        
cufflinks 1.856        
cufflinks 1.021        
cufflinks 1.56        
cufflinks 1.468        

0 Strain