Gene : Glyma.01G132400 G. max Wm82.a2.v1
Defline:  (1 of 20) PF01823 - MAC/Perforin domain (MACPF) Genomic Order:  1324
Name:  ? Glyma.01G132400 Secondary Identifier:  ? PAC:30541976
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G132400 0.5kb upstream 0.5kb upstream 7282 true Chr01: 45094389-45101670 Glycine max
Glyma.01G132400 0.5kb upstream 0.5kb upstream 500 false Chr01: 45094389-45094888 Glycine max
Glyma.01G132400 0.5kb downstream 0.5kb downstream 7282 true Chr01: 45094889-45102170 Glycine max
Glyma.01G132400 0.5kb downstream 0.5kb downstream 500 false Chr01: 45101671-45102170 Glycine max
Glyma.01G132400 1.0kb upstream 1.0kb upstream 7782 true Chr01: 45093889-45101670 Glycine max
Glyma.01G132400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 45093889-45094888 Glycine max
Glyma.01G132400 1.0kb downstream 1.0kb downstream 7782 true Chr01: 45094889-45102670 Glycine max
Glyma.01G132400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 45101671-45102670 Glycine max
Glyma.01G132400 2.0kb upstream 2.0kb upstream 8782 true Chr01: 45092889-45101670 Glycine max
Glyma.01G132400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 45092889-45094888 Glycine max
Glyma.01G132400 2.0kb downstream 2.0kb downstream 8782 true Chr01: 45094889-45103670 Glycine max
Glyma.01G132400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 45101671-45103670 Glycine max
Glyma.01G132400 5.0kb upstream 5.0kb upstream 11782 true Chr01: 45089889-45101670 Glycine max
Glyma.01G132400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 45089889-45094888 Glycine max
Glyma.01G132400 5.0kb downstream 5.0kb downstream 11782 true Chr01: 45094889-45106670 Glycine max
Glyma.01G132400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 45101671-45106670 Glycine max
Glyma.01G132400 10.0kb upstream 10.0kb upstream 16782 true Chr01: 45084889-45101670 Glycine max
Glyma.01G132400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 45084889-45094888 Glycine max
Glyma.01G132400 10.0kb downstream 10.0kb downstream 16782 true Chr01: 45094889-45111670 Glycine max
Glyma.01G132400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 45101671-45111670 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301877 5265 Fabidae View MSA
124063432 5270 Rosid View MSA
123741533 5271 Pentapetalae View MSA
122797212 5272 Eudicot View MSA
122044022 5273 Angiosperm View MSA
121349025 5274 Embryophyte View MSA
123381129 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.0292 0.0 34.7746    
cufflinks 10.5045 0.0 28.0477    
cufflinks 13.6683 0.0 36.5185    
cufflinks 19.6462 0.0 53.1616   High
cufflinks 8.7529 0.0 23.4658   Low
cufflinks 15.4877 0.0 41.4796    
cufflinks 15.2077 0.0 40.6997    
cufflinks 11.8747 0.0 31.6805    
cufflinks 10.0202 0.0 26.7722    
cufflinks 5.239        
cufflinks 4.656        
cufflinks 6.53        
cufflinks 4.517        
cufflinks 3.45       Low
cufflinks 2.818       Low
cufflinks 6.145        
cufflinks 6.551     High  
cufflinks 6.045        
cufflinks 5.573        
cufflinks 5.844        
cufflinks 5.089        
cufflinks 6.737        
cufflinks 5.875        
cufflinks 6.288     High  
cufflinks 5.694        
cufflinks 6.127        

0 Strain