Gene : Glyma.01G131300 G. max Wm82.a2.v1
Defline:  (1 of 32) PF05701 - Weak chloroplast movement under blue light (WEMBL) Genomic Order:  1313
Name:  ? Glyma.01G131300 Secondary Identifier:  ? PAC:30543463
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G131300 0.5kb upstream 0.5kb upstream 3585 true Chr01: 44735909-44739493 Glycine max
Glyma.01G131300 0.5kb upstream 0.5kb upstream 500 false Chr01: 44735909-44736408 Glycine max
Glyma.01G131300 0.5kb downstream 0.5kb downstream 3585 true Chr01: 44736409-44739993 Glycine max
Glyma.01G131300 0.5kb downstream 0.5kb downstream 500 false Chr01: 44739494-44739993 Glycine max
Glyma.01G131300 1.0kb upstream 1.0kb upstream 4085 true Chr01: 44735409-44739493 Glycine max
Glyma.01G131300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 44735409-44736408 Glycine max
Glyma.01G131300 1.0kb downstream 1.0kb downstream 4085 true Chr01: 44736409-44740493 Glycine max
Glyma.01G131300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 44739494-44740493 Glycine max
Glyma.01G131300 2.0kb upstream 2.0kb upstream 5085 true Chr01: 44734409-44739493 Glycine max
Glyma.01G131300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 44734409-44736408 Glycine max
Glyma.01G131300 2.0kb downstream 2.0kb downstream 5085 true Chr01: 44736409-44741493 Glycine max
Glyma.01G131300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 44739494-44741493 Glycine max
Glyma.01G131300 5.0kb upstream 5.0kb upstream 8085 true Chr01: 44731409-44739493 Glycine max
Glyma.01G131300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 44731409-44736408 Glycine max
Glyma.01G131300 5.0kb downstream 5.0kb downstream 8085 true Chr01: 44736409-44744493 Glycine max
Glyma.01G131300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 44739494-44744493 Glycine max
Glyma.01G131300 10.0kb upstream 10.0kb upstream 13085 true Chr01: 44726409-44739493 Glycine max
Glyma.01G131300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 44726409-44736408 Glycine max
Glyma.01G131300 10.0kb downstream 10.0kb downstream 13085 true Chr01: 44736409-44749493 Glycine max
Glyma.01G131300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 44739494-44749493 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311581 5265 Fabidae View MSA
124068222 5270 Rosid View MSA
123738917 5271 Pentapetalae View MSA
122794264 5272 Eudicot View MSA
122043460 5273 Angiosperm View MSA
121351750 5274 Embryophyte View MSA
123382308 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.59878 0.0 5.59186   Low
cufflinks 19.5814 0.0 59.6344   High
cufflinks 3.60887 0.0 12.9216    
cufflinks 8.48574 0.0 25.635    
cufflinks 5.8084 0.0 18.4335    
cufflinks 5.07081 0.0 16.5045    
cufflinks 7.51124 0.0 26.6337    
cufflinks 9.67978 0.0 33.5192    
cufflinks 8.34774 0.0 36.0589    
cufflinks 4.957        
cufflinks 0.398       Low
cufflinks 4.0        
cufflinks 3.948        
cufflinks 3.735        
cufflinks 0.819        
cufflinks 3.567        
cufflinks 1.013        
cufflinks 6.225       High
cufflinks 9.348     High High
cufflinks 2.394        
cufflinks 0.688       Low
cufflinks 3.155        
cufflinks 4.456        
cufflinks 0.292       Low
cufflinks 3.279        
cufflinks 1.029        

0 Strain