Gene : Glyma.01G139800 G. max Wm82.a2.v1
Defline:  (1 of 15) 1.10.3.1 - Catechol oxidase / Tyrosinase Genomic Order:  1398
Name:  ? Glyma.01G139800 Secondary Identifier:  ? PAC:30545099
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6752 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G139800 0.5kb upstream 0.5kb upstream 1325 true Chr01: 46781787-46783111 Glycine max
Glyma.01G139800 0.5kb upstream 0.5kb upstream 500 false Chr01: 46782612-46783111 Glycine max
Glyma.01G139800 0.5kb downstream 0.5kb downstream 1325 true Chr01: 46781287-46782611 Glycine max
Glyma.01G139800 0.5kb downstream 0.5kb downstream 500 false Chr01: 46781287-46781786 Glycine max
Glyma.01G139800 1.0kb upstream 1.0kb upstream 1825 true Chr01: 46781787-46783611 Glycine max
Glyma.01G139800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 46782612-46783611 Glycine max
Glyma.01G139800 1.0kb downstream 1.0kb downstream 1825 true Chr01: 46780787-46782611 Glycine max
Glyma.01G139800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 46780787-46781786 Glycine max
Glyma.01G139800 2.0kb upstream 2.0kb upstream 2825 true Chr01: 46781787-46784611 Glycine max
Glyma.01G139800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 46782612-46784611 Glycine max
Glyma.01G139800 2.0kb downstream 2.0kb downstream 2825 true Chr01: 46779787-46782611 Glycine max
Glyma.01G139800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 46779787-46781786 Glycine max
Glyma.01G139800 5.0kb upstream 5.0kb upstream 5825 true Chr01: 46781787-46787611 Glycine max
Glyma.01G139800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 46782612-46787611 Glycine max
Glyma.01G139800 5.0kb downstream 5.0kb downstream 5825 true Chr01: 46776787-46782611 Glycine max
Glyma.01G139800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 46776787-46781786 Glycine max
Glyma.01G139800 10.0kb upstream 10.0kb upstream 10825 true Chr01: 46781787-46792611 Glycine max
Glyma.01G139800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 46782612-46792611 Glycine max
Glyma.01G139800 10.0kb downstream 10.0kb downstream 10825 true Chr01: 46771787-46782611 Glycine max
Glyma.01G139800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 46771787-46781786 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028792 5273 Angiosperm View MSA
122244997 5265 Fabidae Singleton cluster - no MSA
124050617 5270 Rosid View MSA
123752229 5271 Pentapetalae View MSA
122797227 5272 Eudicot View MSA
121351024 5274 Embryophyte View MSA
123381978 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00832746 0.0 0.0431935 Low High
cufflinks 2.64517E-4 0.0 0.00558317 Low  
cufflinks 1.56729E-4 0.0 0.00426206 Low  
cufflinks 1.39984E-4 0.0 0.00406285 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00136086 0.0 0.0135628 Low  
cufflinks 5.92467E-4 0.0 0.00860718 Low  
cufflinks 0.0293985 0.0 0.132879 Low High
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.051     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain