Gene : Glyma.18G261600 G. max Wm82.a2.v1
Defline:  (1 of 3) 2.5.1.48 - Cystathionine gamma-synthase / O-succinylhomoserine synthetase Genomic Order:  2616
Name:  ? Glyma.18G261600 Secondary Identifier:  ? PAC:30557718
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G261600 0.5kb upstream 0.5kb upstream 5554 true Chr18: 54756319-54761872 Glycine max
Glyma.18G261600 0.5kb upstream 0.5kb upstream 500 false Chr18: 54756319-54756818 Glycine max
Glyma.18G261600 0.5kb downstream 0.5kb downstream 5554 true Chr18: 54756819-54762372 Glycine max
Glyma.18G261600 0.5kb downstream 0.5kb downstream 500 false Chr18: 54761873-54762372 Glycine max
Glyma.18G261600 1.0kb upstream 1.0kb upstream 6054 true Chr18: 54755819-54761872 Glycine max
Glyma.18G261600 1.0kb upstream 1.0kb upstream 1000 false Chr18: 54755819-54756818 Glycine max
Glyma.18G261600 1.0kb downstream 1.0kb downstream 6054 true Chr18: 54756819-54762872 Glycine max
Glyma.18G261600 1.0kb downstream 1.0kb downstream 1000 false Chr18: 54761873-54762872 Glycine max
Glyma.18G261600 2.0kb upstream 2.0kb upstream 7054 true Chr18: 54754819-54761872 Glycine max
Glyma.18G261600 2.0kb upstream 2.0kb upstream 2000 false Chr18: 54754819-54756818 Glycine max
Glyma.18G261600 2.0kb downstream 2.0kb downstream 7054 true Chr18: 54756819-54763872 Glycine max
Glyma.18G261600 2.0kb downstream 2.0kb downstream 2000 false Chr18: 54761873-54763872 Glycine max
Glyma.18G261600 5.0kb upstream 5.0kb upstream 10054 true Chr18: 54751819-54761872 Glycine max
Glyma.18G261600 5.0kb upstream 5.0kb upstream 5000 false Chr18: 54751819-54756818 Glycine max
Glyma.18G261600 5.0kb downstream 5.0kb downstream 10054 true Chr18: 54756819-54766872 Glycine max
Glyma.18G261600 5.0kb downstream 5.0kb downstream 5000 false Chr18: 54761873-54766872 Glycine max
Glyma.18G261600 10.0kb upstream 10.0kb upstream 15054 true Chr18: 54746819-54761872 Glycine max
Glyma.18G261600 10.0kb upstream 10.0kb upstream 10000 false Chr18: 54746819-54756818 Glycine max
Glyma.18G261600 10.0kb downstream 10.0kb downstream 15054 true Chr18: 54756819-54771872 Glycine max
Glyma.18G261600 10.0kb downstream 10.0kb downstream 10000 false Chr18: 54761873-54771872 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041119 5273 Angiosperm View MSA
122299349 5265 Fabidae View MSA
124067979 5270 Rosid View MSA
123738660 5271 Pentapetalae View MSA
122791406 5272 Eudicot View MSA
121346184 5274 Embryophyte View MSA
123428336 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 102.624 0.0 432.107 High High
cufflinks 8.35156 0.0 28.9069   Low
cufflinks 27.7151 0.0 93.4957 High  
cufflinks 38.467 0.0 138.01 High  
cufflinks 65.96 0.0 236.366 High  
cufflinks 28.8484 0.0 98.8249 High  
cufflinks 13.2546 0.0 43.859   Low
cufflinks 50.104 0.0 192.224 High  
cufflinks 117.936 0.0 524.427 High High
cufflinks 5.343        
cufflinks 3.367       Low
cufflinks 4.656        
cufflinks 4.676        
cufflinks 4.546        
cufflinks 4.779        
cufflinks 5.377        
cufflinks 8.221     High High
cufflinks 6.508        
cufflinks 1.969       Low
cufflinks 5.579        
cufflinks 3.132       Low
cufflinks 6.617        
cufflinks 7.607     High High
cufflinks 6.422     High  
cufflinks 4.941        
cufflinks 4.465        

0 Strain