Gene : Glyma.01G136100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR13711//PTHR13711:SF199 - SWI/SNF-RELATED CHROMATIN BINDING PROTEIN Genomic Order:  1361
Name:  ? Glyma.01G136100 Secondary Identifier:  ? PAC:30541688
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G136100 0.5kb upstream 0.5kb upstream 6997 true Chr01: 45917264-45924260 Glycine max
Glyma.01G136100 0.5kb upstream 0.5kb upstream 500 false Chr01: 45917264-45917763 Glycine max
Glyma.01G136100 0.5kb downstream 0.5kb downstream 6997 true Chr01: 45917764-45924760 Glycine max
Glyma.01G136100 0.5kb downstream 0.5kb downstream 500 false Chr01: 45924261-45924760 Glycine max
Glyma.01G136100 1.0kb upstream 1.0kb upstream 7497 true Chr01: 45916764-45924260 Glycine max
Glyma.01G136100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 45916764-45917763 Glycine max
Glyma.01G136100 1.0kb downstream 1.0kb downstream 7497 true Chr01: 45917764-45925260 Glycine max
Glyma.01G136100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 45924261-45925260 Glycine max
Glyma.01G136100 2.0kb upstream 2.0kb upstream 8497 true Chr01: 45915764-45924260 Glycine max
Glyma.01G136100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 45915764-45917763 Glycine max
Glyma.01G136100 2.0kb downstream 2.0kb downstream 8497 true Chr01: 45917764-45926260 Glycine max
Glyma.01G136100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 45924261-45926260 Glycine max
Glyma.01G136100 5.0kb upstream 5.0kb upstream 11497 true Chr01: 45912764-45924260 Glycine max
Glyma.01G136100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 45912764-45917763 Glycine max
Glyma.01G136100 5.0kb downstream 5.0kb downstream 11497 true Chr01: 45917764-45929260 Glycine max
Glyma.01G136100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 45924261-45929260 Glycine max
Glyma.01G136100 10.0kb upstream 10.0kb upstream 16497 true Chr01: 45907764-45924260 Glycine max
Glyma.01G136100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 45907764-45917763 Glycine max
Glyma.01G136100 10.0kb downstream 10.0kb downstream 16497 true Chr01: 45917764-45934260 Glycine max
Glyma.01G136100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 45924261-45934260 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302109 5265 Fabidae View MSA
124060640 5270 Rosid View MSA
123744635 5271 Pentapetalae View MSA
122790158 5272 Eudicot View MSA
122041570 5273 Angiosperm View MSA
121347609 5274 Embryophyte View MSA
123424150 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.7433 0.0 28.6656    
cufflinks 14.9604 0.0 40.0784   High
cufflinks 8.5003 0.0 22.7544    
cufflinks 9.72627 0.0 25.9726    
cufflinks 10.0171 0.0 26.7497    
cufflinks 7.00907 0.0 18.9211   Low
cufflinks 15.6265 0.0 41.8893   High
cufflinks 9.22087 0.0 24.6471    
cufflinks 9.79538 0.0 26.1605    
cufflinks 3.937        
cufflinks 2.37       Low
cufflinks 4.936        
cufflinks 5.475        
cufflinks 6.007        
cufflinks 3.641        
cufflinks 5.984        
cufflinks 3.065       Low
cufflinks 5.506        
cufflinks 8.515     High High
cufflinks 5.685        
cufflinks 2.747       Low
cufflinks 5.994        
cufflinks 7.482     High High
cufflinks 3.117       Low
cufflinks 5.559        
cufflinks 3.186        

0 Strain