Gene : Glyma.01G136300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31636:SF11 - SCARECROW-LIKE PROTEIN 22-RELATED Genomic Order:  1363
Name:  ? Glyma.01G136300 Secondary Identifier:  ? PAC:30543116
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G136300 0.5kb upstream 0.5kb upstream 4053 true Chr01: 46035131-46039183 Glycine max
Glyma.01G136300 0.5kb upstream 0.5kb upstream 500 false Chr01: 46038684-46039183 Glycine max
Glyma.01G136300 0.5kb downstream 0.5kb downstream 4053 true Chr01: 46034631-46038683 Glycine max
Glyma.01G136300 0.5kb downstream 0.5kb downstream 500 false Chr01: 46034631-46035130 Glycine max
Glyma.01G136300 1.0kb upstream 1.0kb upstream 4553 true Chr01: 46035131-46039683 Glycine max
Glyma.01G136300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 46038684-46039683 Glycine max
Glyma.01G136300 1.0kb downstream 1.0kb downstream 4553 true Chr01: 46034131-46038683 Glycine max
Glyma.01G136300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 46034131-46035130 Glycine max
Glyma.01G136300 2.0kb upstream 2.0kb upstream 5553 true Chr01: 46035131-46040683 Glycine max
Glyma.01G136300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 46038684-46040683 Glycine max
Glyma.01G136300 2.0kb downstream 2.0kb downstream 5553 true Chr01: 46033131-46038683 Glycine max
Glyma.01G136300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 46033131-46035130 Glycine max
Glyma.01G136300 5.0kb upstream 5.0kb upstream 8553 true Chr01: 46035131-46043683 Glycine max
Glyma.01G136300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 46038684-46043683 Glycine max
Glyma.01G136300 5.0kb downstream 5.0kb downstream 8553 true Chr01: 46030131-46038683 Glycine max
Glyma.01G136300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 46030131-46035130 Glycine max
Glyma.01G136300 10.0kb upstream 10.0kb upstream 13553 true Chr01: 46035131-46048683 Glycine max
Glyma.01G136300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 46038684-46048683 Glycine max
Glyma.01G136300 10.0kb downstream 10.0kb downstream 13553 true Chr01: 46025131-46038683 Glycine max
Glyma.01G136300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 46025131-46035130 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253972 5265 Fabidae View MSA
124067297 5270 Rosid View MSA
123748991 5271 Pentapetalae View MSA
122793941 5272 Eudicot View MSA
122048418 5273 Angiosperm View MSA
121350524 5274 Embryophyte View MSA
123381771 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.36449 0.0 19.7871    
cufflinks 7.20094 0.0 19.3633    
cufflinks 4.35476 0.0 12.0793   Low
cufflinks 6.55686 0.0 17.6956    
cufflinks 7.79355 0.0 20.8968    
cufflinks 8.03234 0.0 21.5123    
cufflinks 3.88081 0.0 10.8843   Low
cufflinks 5.31141 0.0 14.4947    
cufflinks 9.7874 0.0 26.1206   High
cufflinks 10.082     High High
cufflinks 4.419        
cufflinks 6.021        
cufflinks 9.813     High High
cufflinks 7.914     High  
cufflinks 2.719       Low
cufflinks 5.554        
cufflinks 3.308       Low
cufflinks 3.5       Low
cufflinks 8.607     High High
cufflinks 4.893        
cufflinks 4.144        
cufflinks 5.78        
cufflinks 9.182     High High
cufflinks 5.812        
cufflinks 4.082        
cufflinks 5.203        

0 Strain