Gene : Glyma.01G144300 G. max Wm82.a2.v1

Defline:  (1 of 10) PTHR10891:SF573 - CALCIUM-BINDING PROTEIN CML24-RELATED Genomic Order:  1443
Name:  ? Glyma.01G144300 Secondary Identifier:  ? PAC:30543761

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G144300 0.5kb upstream 0.5kb upstream 2144 true Chr01: 47816450-47818593 Glycine max
Glyma.01G144300 0.5kb upstream 0.5kb upstream 500 false Chr01: 47816450-47816949 Glycine max
Glyma.01G144300 0.5kb downstream 0.5kb downstream 2144 true Chr01: 47816950-47819093 Glycine max
Glyma.01G144300 0.5kb downstream 0.5kb downstream 500 false Chr01: 47818594-47819093 Glycine max
Glyma.01G144300 1.0kb upstream 1.0kb upstream 2644 true Chr01: 47815950-47818593 Glycine max
Glyma.01G144300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 47815950-47816949 Glycine max
Glyma.01G144300 1.0kb downstream 1.0kb downstream 2644 true Chr01: 47816950-47819593 Glycine max
Glyma.01G144300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 47818594-47819593 Glycine max
Glyma.01G144300 2.0kb upstream 2.0kb upstream 3644 true Chr01: 47814950-47818593 Glycine max
Glyma.01G144300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 47814950-47816949 Glycine max
Glyma.01G144300 2.0kb downstream 2.0kb downstream 3644 true Chr01: 47816950-47820593 Glycine max
Glyma.01G144300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 47818594-47820593 Glycine max
Glyma.01G144300 5.0kb upstream 5.0kb upstream 6644 true Chr01: 47811950-47818593 Glycine max
Glyma.01G144300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 47811950-47816949 Glycine max
Glyma.01G144300 5.0kb downstream 5.0kb downstream 6644 true Chr01: 47816950-47823593 Glycine max
Glyma.01G144300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 47818594-47823593 Glycine max
Glyma.01G144300 10.0kb upstream 10.0kb upstream 11644 true Chr01: 47806950-47818593 Glycine max
Glyma.01G144300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 47806950-47816949 Glycine max
Glyma.01G144300 10.0kb downstream 10.0kb downstream 11644 true Chr01: 47816950-47828593 Glycine max
Glyma.01G144300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 47818594-47828593 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311197 5265 Fabidae View MSA
124070912 5270 Rosid View MSA
123743225 5271 Pentapetalae View MSA
122795677 5272 Eudicot View MSA
122049711 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.697093 0.0 2.54585    
cufflinks 0.798057 0.0 2.88745    
cufflinks 18.0934 0.0 48.2804   High
cufflinks 0.538607 0.0 1.99223    
cufflinks 2.28854 0.0 7.5224    
cufflinks 5.30214 0.0 15.4661    
cufflinks 0.0734093 0.0 0.295434 Low Low
cufflinks 2.36242 0.0 7.6779    
cufflinks 6.07621 0.0 17.3989    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 13.48     High High
cufflinks 7.522     High  
cufflinks 0.101        
cufflinks 0.148        
cufflinks 21.945     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.587        
cufflinks 0.396        
cufflinks 0.149        
cufflinks 0.052     Low  
cufflinks 19.333     High High
cufflinks 0.016     Low Low
cufflinks 0.011     Low Low
cufflinks 9.175     High  
cufflinks 0.025     Low Low
cufflinks 5.914        

0 Strain