Gene : Glyma.01G061800 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR31373:SF0 - EMB Genomic Order:  618
Name:  ? Glyma.01G061800 Secondary Identifier:  ? PAC:30544370
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G061800 0.5kb upstream 0.5kb upstream 3205 true Chr01: 8532373-8535577 Glycine max
Glyma.01G061800 0.5kb upstream 0.5kb upstream 500 false Chr01: 8535078-8535577 Glycine max
Glyma.01G061800 0.5kb downstream 0.5kb downstream 3205 true Chr01: 8531873-8535077 Glycine max
Glyma.01G061800 0.5kb downstream 0.5kb downstream 500 false Chr01: 8531873-8532372 Glycine max
Glyma.01G061800 1.0kb upstream 1.0kb upstream 3705 true Chr01: 8532373-8536077 Glycine max
Glyma.01G061800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 8535078-8536077 Glycine max
Glyma.01G061800 1.0kb downstream 1.0kb downstream 3705 true Chr01: 8531373-8535077 Glycine max
Glyma.01G061800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 8531373-8532372 Glycine max
Glyma.01G061800 2.0kb upstream 2.0kb upstream 4705 true Chr01: 8532373-8537077 Glycine max
Glyma.01G061800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 8535078-8537077 Glycine max
Glyma.01G061800 2.0kb downstream 2.0kb downstream 4705 true Chr01: 8530373-8535077 Glycine max
Glyma.01G061800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 8530373-8532372 Glycine max
Glyma.01G061800 5.0kb upstream 5.0kb upstream 7705 true Chr01: 8532373-8540077 Glycine max
Glyma.01G061800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 8535078-8540077 Glycine max
Glyma.01G061800 5.0kb downstream 5.0kb downstream 7705 true Chr01: 8527373-8535077 Glycine max
Glyma.01G061800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 8527373-8532372 Glycine max
Glyma.01G061800 10.0kb upstream 10.0kb upstream 12705 true Chr01: 8532373-8545077 Glycine max
Glyma.01G061800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 8535078-8545077 Glycine max
Glyma.01G061800 10.0kb downstream 10.0kb downstream 12705 true Chr01: 8522373-8535077 Glycine max
Glyma.01G061800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 8522373-8532372 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041452 5273 Angiosperm View MSA
122310004 5265 Fabidae View MSA
124064904 5270 Rosid View MSA
123749450 5271 Pentapetalae View MSA
122797220 5272 Eudicot View MSA
121346363 5274 Embryophyte View MSA
123428550 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.85159 0.0 15.9324    
cufflinks 2.8832 0.0 8.4332   Low
cufflinks 6.34707 0.0 17.2    
cufflinks 6.12291 0.0 16.6198    
cufflinks 12.1646 0.0 32.474   High
cufflinks 14.5476 0.0 38.9812   High
cufflinks 6.23813 0.0 16.9075    
cufflinks 2.46752 0.0 7.34206   Low
cufflinks 6.10315 0.0 16.5675    
cufflinks 0.946       Low
cufflinks 44.074     High High
cufflinks 6.891        
cufflinks 15.596     High  
cufflinks 22.871     High  
cufflinks 62.013     High High
cufflinks 2.552        
cufflinks 6.632     High  
cufflinks 4.185        
cufflinks 5.658        
cufflinks 1.566       Low
cufflinks 12.58     High  
cufflinks 1.899        
cufflinks 2.143        
cufflinks 21.273     High  
cufflinks 1.49       Low
cufflinks 39.927     High High

0 Strain