Gene : Glyma.01G078600 G. max Wm82.a2.v1
Defline:  (1 of 30) PF04640 - PLATZ transcription factor (PLATZ) Genomic Order:  786
Name:  ? Glyma.01G078600 Secondary Identifier:  ? PAC:30542844
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G078600 0.5kb upstream 0.5kb upstream 3301 true Chr01: 20386825-20390125 Glycine max
Glyma.01G078600 0.5kb upstream 0.5kb upstream 500 false Chr01: 20386825-20387324 Glycine max
Glyma.01G078600 0.5kb downstream 0.5kb downstream 3301 true Chr01: 20387325-20390625 Glycine max
Glyma.01G078600 0.5kb downstream 0.5kb downstream 500 false Chr01: 20390126-20390625 Glycine max
Glyma.01G078600 1.0kb upstream 1.0kb upstream 3801 true Chr01: 20386325-20390125 Glycine max
Glyma.01G078600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 20386325-20387324 Glycine max
Glyma.01G078600 1.0kb downstream 1.0kb downstream 3801 true Chr01: 20387325-20391125 Glycine max
Glyma.01G078600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 20390126-20391125 Glycine max
Glyma.01G078600 2.0kb upstream 2.0kb upstream 4801 true Chr01: 20385325-20390125 Glycine max
Glyma.01G078600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 20385325-20387324 Glycine max
Glyma.01G078600 2.0kb downstream 2.0kb downstream 4801 true Chr01: 20387325-20392125 Glycine max
Glyma.01G078600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 20390126-20392125 Glycine max
Glyma.01G078600 5.0kb upstream 5.0kb upstream 7801 true Chr01: 20382325-20390125 Glycine max
Glyma.01G078600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 20382325-20387324 Glycine max
Glyma.01G078600 5.0kb downstream 5.0kb downstream 7801 true Chr01: 20387325-20395125 Glycine max
Glyma.01G078600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 20390126-20395125 Glycine max
Glyma.01G078600 10.0kb upstream 10.0kb upstream 12801 true Chr01: 20377325-20390125 Glycine max
Glyma.01G078600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 20377325-20387324 Glycine max
Glyma.01G078600 10.0kb downstream 10.0kb downstream 12801 true Chr01: 20387325-20400125 Glycine max
Glyma.01G078600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 20390126-20400125 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306547 5265 Fabidae View MSA
124069177 5270 Rosid View MSA
123750215 5271 Pentapetalae View MSA
122789413 5272 Eudicot View MSA
122043598 5273 Angiosperm View MSA
121349888 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.18198 0.0 15.5761   High
cufflinks 4.92579 0.0 17.5294   High
cufflinks 1.15328 0.0 6.28026    
cufflinks 0.19899 0.0 0.970684    
cufflinks 0.346981 0.0 2.32627    
cufflinks 0.68959 0.0 4.06486    
cufflinks 0.201119 0.0 0.994946 Low  
cufflinks 0.1137 0.0 0.449001 Low Low
cufflinks 0.113859 0.0 0.449815 Low Low
cufflinks 0.021     Low Low
cufflinks 0.065        
cufflinks 0.484       High
cufflinks 0.12        
cufflinks 0.063     Low  
cufflinks 0.024     Low Low
cufflinks 0.369        
cufflinks 0.012     Low Low
cufflinks 0.222        
cufflinks 1.948       High
cufflinks 0.181        
cufflinks 0.071        
cufflinks 0.245        
cufflinks 0.452       High
cufflinks 0.074        
cufflinks 0.2        
cufflinks 0.09        

0 Strain