Gene : Glyma.18G252300 G. max Wm82.a2.v1
Defline:  (1 of 17) PTHR31190:SF21 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13 Genomic Order:  2523
Name:  ? Glyma.18G252300 Secondary Identifier:  ? PAC:30555118
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G252300 0.5kb upstream 0.5kb upstream 1422 true Chr18: 53904562-53905983 Glycine max
Glyma.18G252300 0.5kb upstream 0.5kb upstream 500 false Chr18: 53904562-53905061 Glycine max
Glyma.18G252300 0.5kb downstream 0.5kb downstream 1422 true Chr18: 53905062-53906483 Glycine max
Glyma.18G252300 0.5kb downstream 0.5kb downstream 500 false Chr18: 53905984-53906483 Glycine max
Glyma.18G252300 1.0kb upstream 1.0kb upstream 1922 true Chr18: 53904062-53905983 Glycine max
Glyma.18G252300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 53904062-53905061 Glycine max
Glyma.18G252300 1.0kb downstream 1.0kb downstream 1922 true Chr18: 53905062-53906983 Glycine max
Glyma.18G252300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 53905984-53906983 Glycine max
Glyma.18G252300 2.0kb upstream 2.0kb upstream 2922 true Chr18: 53903062-53905983 Glycine max
Glyma.18G252300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 53903062-53905061 Glycine max
Glyma.18G252300 2.0kb downstream 2.0kb downstream 2922 true Chr18: 53905062-53907983 Glycine max
Glyma.18G252300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 53905984-53907983 Glycine max
Glyma.18G252300 5.0kb upstream 5.0kb upstream 5922 true Chr18: 53900062-53905983 Glycine max
Glyma.18G252300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 53900062-53905061 Glycine max
Glyma.18G252300 5.0kb downstream 5.0kb downstream 5922 true Chr18: 53905062-53910983 Glycine max
Glyma.18G252300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 53905984-53910983 Glycine max
Glyma.18G252300 10.0kb upstream 10.0kb upstream 10922 true Chr18: 53895062-53905983 Glycine max
Glyma.18G252300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 53895062-53905061 Glycine max
Glyma.18G252300 10.0kb downstream 10.0kb downstream 10922 true Chr18: 53905062-53915983 Glycine max
Glyma.18G252300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 53905984-53915983 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315208 5265 Fabidae View MSA
124072415 5270 Rosid View MSA
123749179 5271 Pentapetalae View MSA
122791440 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.21524 0.0 4.42535    
cufflinks 0.0225237 0.0 0.102146 Low Low
cufflinks 0.412227 0.0 1.58254    
cufflinks 0.0251034 0.0 0.112645 Low Low
cufflinks 14.114 0.0 39.0676    
cufflinks 22.2493 0.0 59.877   High
cufflinks 0.119491 0.0 0.480888 Low  
cufflinks 3.98023 0.0 12.9746    
cufflinks 16.6688 0.0 45.5997   High
cufflinks 9.018     High  
cufflinks 3.417        
cufflinks 0.135        
cufflinks 29.466     High High
cufflinks 15.287     High High
cufflinks 4.521        
cufflinks 0.2        
cufflinks 5.192        
cufflinks 0.012     Low Low
cufflinks 0.089     Low Low
cufflinks 0.075     Low Low
cufflinks 2.257        
cufflinks 0.21        
cufflinks 0.428        
cufflinks 6.468     High  
cufflinks 0.118        
cufflinks 5.241        

0 Strain