Gene : Glyma.01G073600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11877//PTHR11877:SF25 - HYDROXYMETHYLGLUTARYL-COA SYNTHASE Genomic Order:  736
Name:  ? Glyma.01G073600 Secondary Identifier:  ? PAC:30542152
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G073600 0.5kb upstream 0.5kb upstream 2628 true Chr01: 14209442-14212069 Glycine max
Glyma.01G073600 0.5kb upstream 0.5kb upstream 500 false Chr01: 14211570-14212069 Glycine max
Glyma.01G073600 0.5kb downstream 0.5kb downstream 2628 true Chr01: 14208942-14211569 Glycine max
Glyma.01G073600 0.5kb downstream 0.5kb downstream 500 false Chr01: 14208942-14209441 Glycine max
Glyma.01G073600 1.0kb upstream 1.0kb upstream 3128 true Chr01: 14209442-14212569 Glycine max
Glyma.01G073600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 14211570-14212569 Glycine max
Glyma.01G073600 1.0kb downstream 1.0kb downstream 3128 true Chr01: 14208442-14211569 Glycine max
Glyma.01G073600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 14208442-14209441 Glycine max
Glyma.01G073600 2.0kb upstream 2.0kb upstream 4128 true Chr01: 14209442-14213569 Glycine max
Glyma.01G073600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 14211570-14213569 Glycine max
Glyma.01G073600 2.0kb downstream 2.0kb downstream 4128 true Chr01: 14207442-14211569 Glycine max
Glyma.01G073600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 14207442-14209441 Glycine max
Glyma.01G073600 5.0kb upstream 5.0kb upstream 7128 true Chr01: 14209442-14216569 Glycine max
Glyma.01G073600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 14211570-14216569 Glycine max
Glyma.01G073600 5.0kb downstream 5.0kb downstream 7128 true Chr01: 14204442-14211569 Glycine max
Glyma.01G073600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 14204442-14209441 Glycine max
Glyma.01G073600 10.0kb upstream 10.0kb upstream 12128 true Chr01: 14209442-14221569 Glycine max
Glyma.01G073600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 14211570-14221569 Glycine max
Glyma.01G073600 10.0kb downstream 10.0kb downstream 12128 true Chr01: 14199442-14211569 Glycine max
Glyma.01G073600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 14199442-14209441 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305000 5265 Fabidae View MSA
124068304 5270 Rosid View MSA
123739380 5271 Pentapetalae View MSA
122792095 5272 Eudicot View MSA
122045794 5273 Angiosperm View MSA
121348952 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.274338 0.0 1.04678   High
cufflinks 0.881679 0.0 3.15807   High
cufflinks 0.0215883 0.0 0.0935113 Low  
cufflinks 0.0112237 0.0 0.0515634 Low Low
cufflinks 0.0246755 0.0 0.105747 Low  
cufflinks 0.080441 0.0 0.321775 Low  
cufflinks 0.0515677 0.0 0.210161 Low  
cufflinks 0.0130879 0.0 0.0591965 Low  
cufflinks 0.03     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.043     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.104        
cufflinks 0.017     Low Low
cufflinks 9.938     High High
cufflinks 0.245        
cufflinks 0.11        
cufflinks 0.012     Low Low
cufflinks 0.109        
cufflinks 0.405        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.17        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain