Gene : Glyma.01G074000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23163:SF3 - E3 UBIQUITIN-PROTEIN LIGASE BRE1-LIKE 1 Genomic Order:  740
Name:  ? Glyma.01G074000 Secondary Identifier:  ? PAC:30542403
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G074000 0.5kb upstream 0.5kb upstream 41784 true Chr01: 14637466-14679249 Glycine max
Glyma.01G074000 0.5kb upstream 0.5kb upstream 500 false Chr01: 14637466-14637965 Glycine max
Glyma.01G074000 0.5kb downstream 0.5kb downstream 41784 true Chr01: 14637966-14679749 Glycine max
Glyma.01G074000 0.5kb downstream 0.5kb downstream 500 false Chr01: 14679250-14679749 Glycine max
Glyma.01G074000 1.0kb upstream 1.0kb upstream 42284 true Chr01: 14636966-14679249 Glycine max
Glyma.01G074000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 14636966-14637965 Glycine max
Glyma.01G074000 1.0kb downstream 1.0kb downstream 42284 true Chr01: 14637966-14680249 Glycine max
Glyma.01G074000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 14679250-14680249 Glycine max
Glyma.01G074000 2.0kb upstream 2.0kb upstream 43284 true Chr01: 14635966-14679249 Glycine max
Glyma.01G074000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 14635966-14637965 Glycine max
Glyma.01G074000 2.0kb downstream 2.0kb downstream 43284 true Chr01: 14637966-14681249 Glycine max
Glyma.01G074000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 14679250-14681249 Glycine max
Glyma.01G074000 5.0kb upstream 5.0kb upstream 46284 true Chr01: 14632966-14679249 Glycine max
Glyma.01G074000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 14632966-14637965 Glycine max
Glyma.01G074000 5.0kb downstream 5.0kb downstream 46284 true Chr01: 14637966-14684249 Glycine max
Glyma.01G074000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 14679250-14684249 Glycine max
Glyma.01G074000 10.0kb upstream 10.0kb upstream 51284 true Chr01: 14627966-14679249 Glycine max
Glyma.01G074000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 14627966-14637965 Glycine max
Glyma.01G074000 10.0kb downstream 10.0kb downstream 51284 true Chr01: 14637966-14689249 Glycine max
Glyma.01G074000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 14679250-14689249 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307119 5265 Fabidae View MSA
124061906 5270 Rosid View MSA
123753299 5271 Pentapetalae View MSA
122793673 5272 Eudicot View MSA
122042098 5273 Angiosperm View MSA
121349326 5274 Embryophyte View MSA
123423997 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.92671 0.0 34.6411   High
cufflinks 5.86301 0.0 22.794    
cufflinks 8.93654 0.0 35.3784   High
cufflinks 4.94816 0.0 26.7534    
cufflinks 3.74401 0.0 17.0315   Low
cufflinks 4.13805 0.0 19.6749    
cufflinks 6.10832 0.0 24.1076    
cufflinks 4.20749 0.0 17.0601    
cufflinks 6.52243 0.0 25.4865    
cufflinks 0.138       Low
cufflinks 0.335        
cufflinks 0.338        
cufflinks 0.153       Low
cufflinks 0.156       Low
cufflinks 0.368       High
cufflinks 0.262        
cufflinks 0.155       Low
cufflinks 0.318        
cufflinks 0.225        
cufflinks 0.334        
cufflinks 0.329        
cufflinks 0.317        
cufflinks 0.243        
cufflinks 0.286        
cufflinks 0.31        
cufflinks 0.237        

0 Strain