Gene : Glyma.18G253000 G. max Wm82.a2.v1
Genomic Order:  2530 Name:  ? Glyma.18G253000
Secondary Identifier:  ? PAC:30557855
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G253000 0.5kb upstream 0.5kb upstream 4208 true Chr18: 53940666-53944873 Glycine max
Glyma.18G253000 0.5kb upstream 0.5kb upstream 500 false Chr18: 53944374-53944873 Glycine max
Glyma.18G253000 0.5kb downstream 0.5kb downstream 4208 true Chr18: 53940166-53944373 Glycine max
Glyma.18G253000 0.5kb downstream 0.5kb downstream 500 false Chr18: 53940166-53940665 Glycine max
Glyma.18G253000 1.0kb upstream 1.0kb upstream 4708 true Chr18: 53940666-53945373 Glycine max
Glyma.18G253000 1.0kb upstream 1.0kb upstream 1000 false Chr18: 53944374-53945373 Glycine max
Glyma.18G253000 1.0kb downstream 1.0kb downstream 4708 true Chr18: 53939666-53944373 Glycine max
Glyma.18G253000 1.0kb downstream 1.0kb downstream 1000 false Chr18: 53939666-53940665 Glycine max
Glyma.18G253000 2.0kb upstream 2.0kb upstream 5708 true Chr18: 53940666-53946373 Glycine max
Glyma.18G253000 2.0kb upstream 2.0kb upstream 2000 false Chr18: 53944374-53946373 Glycine max
Glyma.18G253000 2.0kb downstream 2.0kb downstream 5708 true Chr18: 53938666-53944373 Glycine max
Glyma.18G253000 2.0kb downstream 2.0kb downstream 2000 false Chr18: 53938666-53940665 Glycine max
Glyma.18G253000 5.0kb upstream 5.0kb upstream 8708 true Chr18: 53940666-53949373 Glycine max
Glyma.18G253000 5.0kb upstream 5.0kb upstream 5000 false Chr18: 53944374-53949373 Glycine max
Glyma.18G253000 5.0kb downstream 5.0kb downstream 8708 true Chr18: 53935666-53944373 Glycine max
Glyma.18G253000 5.0kb downstream 5.0kb downstream 5000 false Chr18: 53935666-53940665 Glycine max
Glyma.18G253000 10.0kb upstream 10.0kb upstream 13708 true Chr18: 53940666-53954373 Glycine max
Glyma.18G253000 10.0kb upstream 10.0kb upstream 10000 false Chr18: 53944374-53954373 Glycine max
Glyma.18G253000 10.0kb downstream 10.0kb downstream 13708 true Chr18: 53930666-53944373 Glycine max
Glyma.18G253000 10.0kb downstream 10.0kb downstream 10000 false Chr18: 53930666-53940665 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296201 5265 Fabidae View MSA
124050535 5270 Rosid View MSA
123740345 5271 Pentapetalae View MSA
122790196 5272 Eudicot View MSA
122045175 5273 Angiosperm View MSA
121351591 5274 Embryophyte View MSA
123427027 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.7995 0.0 49.711    
cufflinks 9.11502 0.0 36.0345    
cufflinks 14.2874 0.0 55.037    
cufflinks 11.5065 0.0 44.466    
cufflinks 6.56118 0.0 24.8618   Low
cufflinks 14.2251 0.0 54.6841    
cufflinks 15.3686 0.0 58.9233   High
cufflinks 9.0377 0.0 36.0457    
cufflinks 8.18098 0.0 32.9626    
cufflinks 1.453       Low
cufflinks 2.492        
cufflinks 3.245        
cufflinks 2.054        
cufflinks 1.447       Low
cufflinks 2.962        
cufflinks 2.003        
cufflinks 3.421        
cufflinks 2.602        
cufflinks 2.134        
cufflinks 2.119        
cufflinks 4.564       High
cufflinks 2.323        
cufflinks 2.139        
cufflinks 2.49        
cufflinks 2.09        
cufflinks 5.08       High

0 Strain