Gene : Glyma.18G253300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12713:SF14 - V-TYPE PROTON ATPASE SUBUNIT G3 Genomic Order:  2533
Name:  ? Glyma.18G253300 Secondary Identifier:  ? PAC:30558163
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G253300 0.5kb upstream 0.5kb upstream 2542 true Chr18: 53966201-53968742 Glycine max
Glyma.18G253300 0.5kb upstream 0.5kb upstream 500 false Chr18: 53966201-53966700 Glycine max
Glyma.18G253300 0.5kb downstream 0.5kb downstream 2542 true Chr18: 53966701-53969242 Glycine max
Glyma.18G253300 0.5kb downstream 0.5kb downstream 500 false Chr18: 53968743-53969242 Glycine max
Glyma.18G253300 1.0kb upstream 1.0kb upstream 3042 true Chr18: 53965701-53968742 Glycine max
Glyma.18G253300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 53965701-53966700 Glycine max
Glyma.18G253300 1.0kb downstream 1.0kb downstream 3042 true Chr18: 53966701-53969742 Glycine max
Glyma.18G253300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 53968743-53969742 Glycine max
Glyma.18G253300 2.0kb upstream 2.0kb upstream 4042 true Chr18: 53964701-53968742 Glycine max
Glyma.18G253300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 53964701-53966700 Glycine max
Glyma.18G253300 2.0kb downstream 2.0kb downstream 4042 true Chr18: 53966701-53970742 Glycine max
Glyma.18G253300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 53968743-53970742 Glycine max
Glyma.18G253300 5.0kb upstream 5.0kb upstream 7042 true Chr18: 53961701-53968742 Glycine max
Glyma.18G253300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 53961701-53966700 Glycine max
Glyma.18G253300 5.0kb downstream 5.0kb downstream 7042 true Chr18: 53966701-53973742 Glycine max
Glyma.18G253300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 53968743-53973742 Glycine max
Glyma.18G253300 10.0kb upstream 10.0kb upstream 12042 true Chr18: 53956701-53968742 Glycine max
Glyma.18G253300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 53956701-53966700 Glycine max
Glyma.18G253300 10.0kb downstream 10.0kb downstream 12042 true Chr18: 53966701-53978742 Glycine max
Glyma.18G253300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 53968743-53978742 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041228 5273 Angiosperm View MSA
122307238 5265 Fabidae View MSA
124071084 5270 Rosid View MSA
123752042 5271 Pentapetalae View MSA
122795974 5272 Eudicot View MSA
121344962 5274 Embryophyte View MSA
123424179 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0278389 0.0 0.12625 Low  
cufflinks 3.83977 0.0 12.8803   High
cufflinks 0.0153969 0.0 0.0740287 Low Low
cufflinks 0.937961 0.0 3.51085    
cufflinks 17.1104 0.0 47.6781   High
cufflinks 0.0264358 0.0 0.121081 Low  
cufflinks 0.0284437 0.0 0.128735 Low  
cufflinks 0.577403 0.0 2.20513    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.513        
cufflinks 1.268        
cufflinks 0.988        
cufflinks 0.233        
cufflinks 0.112        
cufflinks 0.008     Low Low
cufflinks 1.85        
cufflinks 6.176       High
cufflinks 0.084     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.023        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.458        
cufflinks 0.007     Low Low
cufflinks 1.671        

0 Strain