Gene : Glyma.01G080200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10351 - TRANSCRIPTION FACTOR BTF3 Genomic Order:  802
Name:  ? Glyma.01G080200 Secondary Identifier:  ? PAC:30542280
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G080200 0.5kb upstream 0.5kb upstream 3963 true Chr01: 21841493-21845455 Glycine max
Glyma.01G080200 0.5kb upstream 0.5kb upstream 500 false Chr01: 21844956-21845455 Glycine max
Glyma.01G080200 0.5kb downstream 0.5kb downstream 3963 true Chr01: 21840993-21844955 Glycine max
Glyma.01G080200 0.5kb downstream 0.5kb downstream 500 false Chr01: 21840993-21841492 Glycine max
Glyma.01G080200 1.0kb upstream 1.0kb upstream 4463 true Chr01: 21841493-21845955 Glycine max
Glyma.01G080200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 21844956-21845955 Glycine max
Glyma.01G080200 1.0kb downstream 1.0kb downstream 4463 true Chr01: 21840493-21844955 Glycine max
Glyma.01G080200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 21840493-21841492 Glycine max
Glyma.01G080200 2.0kb upstream 2.0kb upstream 5463 true Chr01: 21841493-21846955 Glycine max
Glyma.01G080200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 21844956-21846955 Glycine max
Glyma.01G080200 2.0kb downstream 2.0kb downstream 5463 true Chr01: 21839493-21844955 Glycine max
Glyma.01G080200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 21839493-21841492 Glycine max
Glyma.01G080200 5.0kb upstream 5.0kb upstream 8463 true Chr01: 21841493-21849955 Glycine max
Glyma.01G080200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 21844956-21849955 Glycine max
Glyma.01G080200 5.0kb downstream 5.0kb downstream 8463 true Chr01: 21836493-21844955 Glycine max
Glyma.01G080200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 21836493-21841492 Glycine max
Glyma.01G080200 10.0kb upstream 10.0kb upstream 13463 true Chr01: 21841493-21854955 Glycine max
Glyma.01G080200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 21844956-21854955 Glycine max
Glyma.01G080200 10.0kb downstream 10.0kb downstream 13463 true Chr01: 21831493-21844955 Glycine max
Glyma.01G080200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 21831493-21841492 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312146 5265 Fabidae View MSA
124060990 5270 Rosid View MSA
123752380 5271 Pentapetalae View MSA
122793181 5272 Eudicot View MSA
122044361 5273 Angiosperm View MSA
121348079 5274 Embryophyte View MSA
123423973 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.5645 0.0 92.7254 High  
cufflinks 41.1775 0.0 111.459 High  
cufflinks 22.0612 0.0 58.8668 High Low
cufflinks 36.4959 0.0 98.2925 High  
cufflinks 65.7726 0.0 184.708 High High
cufflinks 74.7168 0.0 213.019 High High
cufflinks 33.2447 0.0 89.0639 High  
cufflinks 41.079 0.0 111.231 High  
cufflinks 51.5271 0.0 141.57 High  
cufflinks 14.608     High  
cufflinks 4.638       Low
cufflinks 11.407     High  
cufflinks 34.449     High High
cufflinks 47.627     High High
cufflinks 3.359       Low
cufflinks 11.696     High  
cufflinks 7.564     High  
cufflinks 12.548     High  
cufflinks 12.95     High  
cufflinks 11.409     High  
cufflinks 6.381     High  
cufflinks 10.028     High  
cufflinks 9.924     High  
cufflinks 5.928        
cufflinks 13.221     High  
cufflinks 8.311     High  

0 Strain