Gene : Glyma.01G079800 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR31375:SF31 - F3F20.10 PROTEIN-RELATED Genomic Order:  798
Name:  ? Glyma.01G079800 Secondary Identifier:  ? PAC:30541853
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1081 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G079800 0.5kb upstream 0.5kb upstream 3470 true Chr01: 21339707-21343176 Glycine max
Glyma.01G079800 0.5kb upstream 0.5kb upstream 500 false Chr01: 21339707-21340206 Glycine max
Glyma.01G079800 0.5kb downstream 0.5kb downstream 3470 true Chr01: 21340207-21343676 Glycine max
Glyma.01G079800 0.5kb downstream 0.5kb downstream 500 false Chr01: 21343177-21343676 Glycine max
Glyma.01G079800 1.0kb upstream 1.0kb upstream 3970 true Chr01: 21339207-21343176 Glycine max
Glyma.01G079800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 21339207-21340206 Glycine max
Glyma.01G079800 1.0kb downstream 1.0kb downstream 3970 true Chr01: 21340207-21344176 Glycine max
Glyma.01G079800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 21343177-21344176 Glycine max
Glyma.01G079800 2.0kb upstream 2.0kb upstream 4970 true Chr01: 21338207-21343176 Glycine max
Glyma.01G079800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 21338207-21340206 Glycine max
Glyma.01G079800 2.0kb downstream 2.0kb downstream 4970 true Chr01: 21340207-21345176 Glycine max
Glyma.01G079800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 21343177-21345176 Glycine max
Glyma.01G079800 5.0kb upstream 5.0kb upstream 7970 true Chr01: 21335207-21343176 Glycine max
Glyma.01G079800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 21335207-21340206 Glycine max
Glyma.01G079800 5.0kb downstream 5.0kb downstream 7970 true Chr01: 21340207-21348176 Glycine max
Glyma.01G079800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 21343177-21348176 Glycine max
Glyma.01G079800 10.0kb upstream 10.0kb upstream 12970 true Chr01: 21330207-21343176 Glycine max
Glyma.01G079800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 21330207-21340206 Glycine max
Glyma.01G079800 10.0kb downstream 10.0kb downstream 12970 true Chr01: 21340207-21353176 Glycine max
Glyma.01G079800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 21343177-21353176 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309833 5265 Fabidae View MSA
124074410 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.13097 0.0 15.1575    
cufflinks 9.79981 0.0 26.9537    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.16194 0.0 4.11869   Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.113        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.004       High
cufflinks 10.42     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.431        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.171        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.635        

0 Strain