Gene : Glyma.01G089700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10106:SF20 - TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 4-RELATED Genomic Order:  897
Name:  ? Glyma.01G089700 Secondary Identifier:  ? PAC:30542555
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G089700 0.5kb upstream 0.5kb upstream 3848 true Chr01: 27110543-27114390 Glycine max
Glyma.01G089700 0.5kb upstream 0.5kb upstream 500 false Chr01: 27113891-27114390 Glycine max
Glyma.01G089700 0.5kb downstream 0.5kb downstream 3848 true Chr01: 27110043-27113890 Glycine max
Glyma.01G089700 0.5kb downstream 0.5kb downstream 500 false Chr01: 27110043-27110542 Glycine max
Glyma.01G089700 1.0kb upstream 1.0kb upstream 4348 true Chr01: 27110543-27114890 Glycine max
Glyma.01G089700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 27113891-27114890 Glycine max
Glyma.01G089700 1.0kb downstream 1.0kb downstream 4348 true Chr01: 27109543-27113890 Glycine max
Glyma.01G089700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 27109543-27110542 Glycine max
Glyma.01G089700 2.0kb upstream 2.0kb upstream 5348 true Chr01: 27110543-27115890 Glycine max
Glyma.01G089700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 27113891-27115890 Glycine max
Glyma.01G089700 2.0kb downstream 2.0kb downstream 5348 true Chr01: 27108543-27113890 Glycine max
Glyma.01G089700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 27108543-27110542 Glycine max
Glyma.01G089700 5.0kb upstream 5.0kb upstream 8348 true Chr01: 27110543-27118890 Glycine max
Glyma.01G089700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 27113891-27118890 Glycine max
Glyma.01G089700 5.0kb downstream 5.0kb downstream 8348 true Chr01: 27105543-27113890 Glycine max
Glyma.01G089700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 27105543-27110542 Glycine max
Glyma.01G089700 10.0kb upstream 10.0kb upstream 13348 true Chr01: 27110543-27123890 Glycine max
Glyma.01G089700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 27113891-27123890 Glycine max
Glyma.01G089700 10.0kb downstream 10.0kb downstream 13348 true Chr01: 27100543-27113890 Glycine max
Glyma.01G089700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 27100543-27110542 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791770 5273 Angiosperm View MSA
122299146 5265 Fabidae View MSA
124068772 5270 Rosid View MSA
123739569 5271 Pentapetalae View MSA
122791554 5272 Eudicot View MSA
123429174 5275 Viridiplantae View MSA
121352127 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.296919 0.0 1.17907    
cufflinks 0.0628178 0.0 0.291571 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.128925 0.0 0.536465 Low  
cufflinks 0.0660755 0.0 0.292328 Low  
cufflinks 0.33061 0.0 1.30811   High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.003     Low Low
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low High
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low Low
cufflinks 0.004     Low  

0 Strain