Gene : Glyma.01G099700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10285:SF77 - URACIL PHOSPHORIBOSYLTRANSFERASE, CHLOROPLASTIC Genomic Order:  997
Name:  ? Glyma.01G099700 Secondary Identifier:  ? PAC:30544904
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7183 Glycine max pathologic  
Gmax PWY-7196 Glycine max pathologic  
Gmax PWY-7208 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G099700 0.5kb upstream 0.5kb upstream 9395 true Chr01: 33208369-33217763 Glycine max
Glyma.01G099700 0.5kb upstream 0.5kb upstream 500 false Chr01: 33208369-33208868 Glycine max
Glyma.01G099700 0.5kb downstream 0.5kb downstream 9395 true Chr01: 33208869-33218263 Glycine max
Glyma.01G099700 0.5kb downstream 0.5kb downstream 500 false Chr01: 33217764-33218263 Glycine max
Glyma.01G099700 1.0kb upstream 1.0kb upstream 9895 true Chr01: 33207869-33217763 Glycine max
Glyma.01G099700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 33207869-33208868 Glycine max
Glyma.01G099700 1.0kb downstream 1.0kb downstream 9895 true Chr01: 33208869-33218763 Glycine max
Glyma.01G099700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 33217764-33218763 Glycine max
Glyma.01G099700 2.0kb upstream 2.0kb upstream 10895 true Chr01: 33206869-33217763 Glycine max
Glyma.01G099700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 33206869-33208868 Glycine max
Glyma.01G099700 2.0kb downstream 2.0kb downstream 10895 true Chr01: 33208869-33219763 Glycine max
Glyma.01G099700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 33217764-33219763 Glycine max
Glyma.01G099700 5.0kb upstream 5.0kb upstream 13895 true Chr01: 33203869-33217763 Glycine max
Glyma.01G099700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 33203869-33208868 Glycine max
Glyma.01G099700 5.0kb downstream 5.0kb downstream 13895 true Chr01: 33208869-33222763 Glycine max
Glyma.01G099700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 33217764-33222763 Glycine max
Glyma.01G099700 10.0kb upstream 10.0kb upstream 18895 true Chr01: 33198869-33217763 Glycine max
Glyma.01G099700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 33198869-33208868 Glycine max
Glyma.01G099700 10.0kb downstream 10.0kb downstream 18895 true Chr01: 33208869-33227763 Glycine max
Glyma.01G099700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 33217764-33227763 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307289 5265 Fabidae View MSA
124068502 5270 Rosid View MSA
123740781 5271 Pentapetalae View MSA
122786054 5272 Eudicot View MSA
122047935 5273 Angiosperm View MSA
121345361 5274 Embryophyte View MSA
123424478 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.95288 0.0 34.821    
cufflinks 11.0661 0.0 45.2336    
cufflinks 7.65847 0.0 29.7142    
cufflinks 11.8891 0.0 42.0277    
cufflinks 12.0493 0.0 43.2097    
cufflinks 4.85264 0.0 21.631   Low
cufflinks 5.20901 0.0 19.2498   Low
cufflinks 10.7165 0.0 39.1767    
cufflinks 14.9009 0.0 46.7902   High
cufflinks 0.367        
cufflinks 0.238       Low
cufflinks 0.509        
cufflinks 0.429        
cufflinks 0.482        
cufflinks 0.435        
cufflinks 0.418        
cufflinks 0.215       Low
cufflinks 0.687       High
cufflinks 0.642       High
cufflinks 0.455        
cufflinks 0.27        
cufflinks 0.489        
cufflinks 0.468        
cufflinks 0.24       Low
cufflinks 0.451        
cufflinks 0.169       Low

0 Strain