Gene : Glyma.01G097500 G. max Wm82.a2.v1
Defline:  (1 of 3) 1.3.1.91 - tRNA-dihydrouridine(20) synthase (NAD(P)(+)) / tRNA-dihydrouridine synthase 2 Genomic Order:  975
Name:  ? Glyma.01G097500 Secondary Identifier:  ? PAC:30541661
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G097500 0.5kb upstream 0.5kb upstream 9130 true Chr01: 32103090-32112219 Glycine max
Glyma.01G097500 0.5kb upstream 0.5kb upstream 500 false Chr01: 32111720-32112219 Glycine max
Glyma.01G097500 0.5kb downstream 0.5kb downstream 9130 true Chr01: 32102590-32111719 Glycine max
Glyma.01G097500 0.5kb downstream 0.5kb downstream 500 false Chr01: 32102590-32103089 Glycine max
Glyma.01G097500 1.0kb upstream 1.0kb upstream 9630 true Chr01: 32103090-32112719 Glycine max
Glyma.01G097500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 32111720-32112719 Glycine max
Glyma.01G097500 1.0kb downstream 1.0kb downstream 9630 true Chr01: 32102090-32111719 Glycine max
Glyma.01G097500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 32102090-32103089 Glycine max
Glyma.01G097500 2.0kb upstream 2.0kb upstream 10630 true Chr01: 32103090-32113719 Glycine max
Glyma.01G097500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 32111720-32113719 Glycine max
Glyma.01G097500 2.0kb downstream 2.0kb downstream 10630 true Chr01: 32101090-32111719 Glycine max
Glyma.01G097500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 32101090-32103089 Glycine max
Glyma.01G097500 5.0kb upstream 5.0kb upstream 13630 true Chr01: 32103090-32116719 Glycine max
Glyma.01G097500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 32111720-32116719 Glycine max
Glyma.01G097500 5.0kb downstream 5.0kb downstream 13630 true Chr01: 32098090-32111719 Glycine max
Glyma.01G097500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 32098090-32103089 Glycine max
Glyma.01G097500 10.0kb upstream 10.0kb upstream 18630 true Chr01: 32103090-32121719 Glycine max
Glyma.01G097500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 32111720-32121719 Glycine max
Glyma.01G097500 10.0kb downstream 10.0kb downstream 18630 true Chr01: 32093090-32111719 Glycine max
Glyma.01G097500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 32093090-32103089 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308273 5265 Fabidae View MSA
124050521 5270 Rosid View MSA
123743587 5271 Pentapetalae View MSA
122794632 5272 Eudicot View MSA
122048922 5273 Angiosperm View MSA
121348222 5274 Embryophyte View MSA
123428585 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.05569 0.0 19.4745   High
cufflinks 4.33759 0.0 15.5866    
cufflinks 4.93595 0.0 16.7186    
cufflinks 4.22425 0.0 15.1718    
cufflinks 4.72571 0.0 16.231    
cufflinks 5.4292 0.0 18.0338    
cufflinks 3.64448 0.0 13.1232   Low
cufflinks 4.30136 0.0 15.5754    
cufflinks 5.55819 0.0 18.3498    
cufflinks 0.692       Low
cufflinks 0.864        
cufflinks 1.119       High
cufflinks 1.091       High
cufflinks 1.393       High
cufflinks 0.747        
cufflinks 0.732        
cufflinks 0.853        
cufflinks 1.191       High
cufflinks 0.807        
cufflinks 0.772        
cufflinks 0.788        
cufflinks 0.808        
cufflinks 0.874        
cufflinks 0.847        
cufflinks 0.76        
cufflinks 0.661       Low

0 Strain