Gene : Glyma.01G016600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10641:SF579 - MYB DOMAIN PROTEIN 9 Genomic Order:  166
Name:  ? Glyma.01G016600 Secondary Identifier:  ? PAC:30543092
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G016600 0.5kb upstream 0.5kb upstream 3003 true Chr01: 1592408-1595410 Glycine max
Glyma.01G016600 0.5kb upstream 0.5kb upstream 500 false Chr01: 1592408-1592907 Glycine max
Glyma.01G016600 0.5kb downstream 0.5kb downstream 3003 true Chr01: 1592908-1595910 Glycine max
Glyma.01G016600 0.5kb downstream 0.5kb downstream 500 false Chr01: 1595411-1595910 Glycine max
Glyma.01G016600 1.0kb upstream 1.0kb upstream 3503 true Chr01: 1591908-1595410 Glycine max
Glyma.01G016600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1591908-1592907 Glycine max
Glyma.01G016600 1.0kb downstream 1.0kb downstream 3503 true Chr01: 1592908-1596410 Glycine max
Glyma.01G016600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1595411-1596410 Glycine max
Glyma.01G016600 2.0kb upstream 2.0kb upstream 4503 true Chr01: 1590908-1595410 Glycine max
Glyma.01G016600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1590908-1592907 Glycine max
Glyma.01G016600 2.0kb downstream 2.0kb downstream 4503 true Chr01: 1592908-1597410 Glycine max
Glyma.01G016600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1595411-1597410 Glycine max
Glyma.01G016600 5.0kb upstream 5.0kb upstream 7503 true Chr01: 1587908-1595410 Glycine max
Glyma.01G016600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1587908-1592907 Glycine max
Glyma.01G016600 5.0kb downstream 5.0kb downstream 7503 true Chr01: 1592908-1600410 Glycine max
Glyma.01G016600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1595411-1600410 Glycine max
Glyma.01G016600 10.0kb upstream 10.0kb upstream 12503 true Chr01: 1582908-1595410 Glycine max
Glyma.01G016600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1582908-1592907 Glycine max
Glyma.01G016600 10.0kb downstream 10.0kb downstream 12503 true Chr01: 1592908-1605410 Glycine max
Glyma.01G016600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1595411-1605410 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313272 5265 Fabidae View MSA
124071827 5270 Rosid View MSA
123751213 5271 Pentapetalae View MSA
122792208 5272 Eudicot View MSA
122045229 5273 Angiosperm View MSA
121310421 5274 Embryophyte View MSA
123347909 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.178203 0.0 0.700337 Low  
cufflinks 0.0171946 0.0 0.0779781 Low Low
cufflinks 1.9703 0.0 6.76248   High
cufflinks 0.437564 0.0 1.65469    
cufflinks 0.649294 0.0 2.41288    
cufflinks 0.233684 0.0 0.90917 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.41653 0.0 5.00468    
cufflinks 1.16657 0.0 4.18923    
cufflinks 0.308        
cufflinks 10.755     High High
cufflinks 0.782        
cufflinks 2.209        
cufflinks 0.203        
cufflinks 1.135        
cufflinks 0.059     Low Low
cufflinks 4.583        
cufflinks 0.244        
cufflinks 0.125        
cufflinks 0.036     Low Low
cufflinks 4.97       High
cufflinks 0.041     Low Low
cufflinks 0.117        
cufflinks 18.735     High High
cufflinks 0.043     Low Low
cufflinks 10.141     High High

0 Strain