Gene : Glyma.01G016800 G. max Wm82.a2.v1
Defline:  (1 of 6) KOG3140 - Predicted membrane protein Genomic Order:  168
Name:  ? Glyma.01G016800 Secondary Identifier:  ? PAC:30544698
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G016800 0.5kb upstream 0.5kb upstream 3975 true Chr01: 1608624-1612598 Glycine max
Glyma.01G016800 0.5kb upstream 0.5kb upstream 500 false Chr01: 1608624-1609123 Glycine max
Glyma.01G016800 0.5kb downstream 0.5kb downstream 3975 true Chr01: 1609124-1613098 Glycine max
Glyma.01G016800 0.5kb downstream 0.5kb downstream 500 false Chr01: 1612599-1613098 Glycine max
Glyma.01G016800 1.0kb upstream 1.0kb upstream 4475 true Chr01: 1608124-1612598 Glycine max
Glyma.01G016800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1608124-1609123 Glycine max
Glyma.01G016800 1.0kb downstream 1.0kb downstream 4475 true Chr01: 1609124-1613598 Glycine max
Glyma.01G016800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1612599-1613598 Glycine max
Glyma.01G016800 2.0kb upstream 2.0kb upstream 5475 true Chr01: 1607124-1612598 Glycine max
Glyma.01G016800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1607124-1609123 Glycine max
Glyma.01G016800 2.0kb downstream 2.0kb downstream 5475 true Chr01: 1609124-1614598 Glycine max
Glyma.01G016800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1612599-1614598 Glycine max
Glyma.01G016800 5.0kb upstream 5.0kb upstream 8475 true Chr01: 1604124-1612598 Glycine max
Glyma.01G016800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1604124-1609123 Glycine max
Glyma.01G016800 5.0kb downstream 5.0kb downstream 8475 true Chr01: 1609124-1617598 Glycine max
Glyma.01G016800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1612599-1617598 Glycine max
Glyma.01G016800 10.0kb upstream 10.0kb upstream 13475 true Chr01: 1599124-1612598 Glycine max
Glyma.01G016800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1599124-1609123 Glycine max
Glyma.01G016800 10.0kb downstream 10.0kb downstream 13475 true Chr01: 1609124-1622598 Glycine max
Glyma.01G016800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1612599-1622598 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300416 5265 Fabidae View MSA
124068758 5270 Rosid View MSA
123751002 5271 Pentapetalae View MSA
122793414 5272 Eudicot View MSA
122043784 5273 Angiosperm View MSA
121348714 5274 Embryophyte View MSA
123428145 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.3843 0.0 67.7786 High  
cufflinks 15.2787 0.0 41.0479    
cufflinks 48.1785 0.0 133.006 High High
cufflinks 13.9655 0.0 37.6316    
cufflinks 14.8228 0.0 39.8601    
cufflinks 20.9119 0.0 55.797    
cufflinks 6.243 0.0 18.0578   Low
cufflinks 25.2162 0.0 67.3464 High  
cufflinks 11.4431 0.0 31.1811    
cufflinks 15.384     High  
cufflinks 20.286     High High
cufflinks 12.918     High  
cufflinks 4.911       Low
cufflinks 3.997       Low
cufflinks 8.151     High  
cufflinks 14.321     High  
cufflinks 11.82     High  
cufflinks 9.293     High  
cufflinks 8.432     High  
cufflinks 15.708     High  
cufflinks 19.169     High High
cufflinks 14.281     High  
cufflinks 10.547     High  
cufflinks 20.728     High High
cufflinks 16.005     High  
cufflinks 15.778     High  

0 Strain