Gene : Glyma.01G015100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31906:SF5 - PLASTID-LIPID-ASSOCIATED PROTEIN 3, CHLOROPLASTIC-RELATED Genomic Order:  151
Name:  ? Glyma.01G015100 Secondary Identifier:  ? PAC:30545192
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G015100 0.5kb upstream 0.5kb upstream 3665 true Chr01: 1496346-1500010 Glycine max
Glyma.01G015100 0.5kb upstream 0.5kb upstream 500 false Chr01: 1496346-1496845 Glycine max
Glyma.01G015100 0.5kb downstream 0.5kb downstream 3665 true Chr01: 1496846-1500510 Glycine max
Glyma.01G015100 0.5kb downstream 0.5kb downstream 500 false Chr01: 1500011-1500510 Glycine max
Glyma.01G015100 1.0kb upstream 1.0kb upstream 4165 true Chr01: 1495846-1500010 Glycine max
Glyma.01G015100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1495846-1496845 Glycine max
Glyma.01G015100 1.0kb downstream 1.0kb downstream 4165 true Chr01: 1496846-1501010 Glycine max
Glyma.01G015100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1500011-1501010 Glycine max
Glyma.01G015100 2.0kb upstream 2.0kb upstream 5165 true Chr01: 1494846-1500010 Glycine max
Glyma.01G015100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1494846-1496845 Glycine max
Glyma.01G015100 2.0kb downstream 2.0kb downstream 5165 true Chr01: 1496846-1502010 Glycine max
Glyma.01G015100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1500011-1502010 Glycine max
Glyma.01G015100 5.0kb upstream 5.0kb upstream 8165 true Chr01: 1491846-1500010 Glycine max
Glyma.01G015100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1491846-1496845 Glycine max
Glyma.01G015100 5.0kb downstream 5.0kb downstream 8165 true Chr01: 1496846-1505010 Glycine max
Glyma.01G015100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1500011-1505010 Glycine max
Glyma.01G015100 10.0kb upstream 10.0kb upstream 13165 true Chr01: 1486846-1500010 Glycine max
Glyma.01G015100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1486846-1496845 Glycine max
Glyma.01G015100 10.0kb downstream 10.0kb downstream 13165 true Chr01: 1496846-1510010 Glycine max
Glyma.01G015100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1500011-1510010 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306951 5265 Fabidae View MSA
124073246 5270 Rosid View MSA
123747312 5271 Pentapetalae View MSA
122796946 5272 Eudicot View MSA
122048215 5273 Angiosperm View MSA
121346450 5274 Embryophyte View MSA
123427802 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.3315 0.0 198.024 High High
cufflinks 24.0842 0.0 92.9513 High  
cufflinks 15.893 0.0 62.6564    
cufflinks 27.298 0.0 106.632 High  
cufflinks 14.6514 0.0 56.9238    
cufflinks 8.46658 0.0 27.6271   Low
cufflinks 22.4713 0.0 85.5275 High  
cufflinks 15.8535 0.0 63.8051    
cufflinks 12.0902 0.0 48.8037    
cufflinks 3.993        
cufflinks 0.571       Low
cufflinks 5.704        
cufflinks 2.083        
cufflinks 2.147        
cufflinks 1.503        
cufflinks 8.586     High High
cufflinks 1.104       Low
cufflinks 6.934        
cufflinks 6.427        
cufflinks 6.728        
cufflinks 0.858       Low
cufflinks 7.035        
cufflinks 8.76     High High
cufflinks 0.926       Low
cufflinks 7.77     High High
cufflinks 0.95       Low

0 Strain