Gene : Glyma.01G024800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR13697//PTHR13697:SF20 - PHOSPHOFRUCTOKINASE Genomic Order:  248
Name:  ? Glyma.01G024800 Secondary Identifier:  ? PAC:30544302
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ANAEROFRUCAT-PWY Glycine max pathologic  
Gmax ANAGLYCOLYSIS-PWY Glycine max pathologic  
Gmax PWY-1042 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G024800 0.5kb upstream 0.5kb upstream 7782 true Chr01: 2537581-2545362 Glycine max
Glyma.01G024800 0.5kb upstream 0.5kb upstream 500 false Chr01: 2544863-2545362 Glycine max
Glyma.01G024800 0.5kb downstream 0.5kb downstream 7782 true Chr01: 2537081-2544862 Glycine max
Glyma.01G024800 0.5kb downstream 0.5kb downstream 500 false Chr01: 2537081-2537580 Glycine max
Glyma.01G024800 1.0kb upstream 1.0kb upstream 8282 true Chr01: 2537581-2545862 Glycine max
Glyma.01G024800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2544863-2545862 Glycine max
Glyma.01G024800 1.0kb downstream 1.0kb downstream 8282 true Chr01: 2536581-2544862 Glycine max
Glyma.01G024800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2536581-2537580 Glycine max
Glyma.01G024800 2.0kb upstream 2.0kb upstream 9282 true Chr01: 2537581-2546862 Glycine max
Glyma.01G024800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2544863-2546862 Glycine max
Glyma.01G024800 2.0kb downstream 2.0kb downstream 9282 true Chr01: 2535581-2544862 Glycine max
Glyma.01G024800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2535581-2537580 Glycine max
Glyma.01G024800 5.0kb upstream 5.0kb upstream 12282 true Chr01: 2537581-2549862 Glycine max
Glyma.01G024800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2544863-2549862 Glycine max
Glyma.01G024800 5.0kb downstream 5.0kb downstream 12282 true Chr01: 2532581-2544862 Glycine max
Glyma.01G024800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2532581-2537580 Glycine max
Glyma.01G024800 10.0kb upstream 10.0kb upstream 17282 true Chr01: 2537581-2554862 Glycine max
Glyma.01G024800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2544863-2554862 Glycine max
Glyma.01G024800 10.0kb downstream 10.0kb downstream 17282 true Chr01: 2527581-2544862 Glycine max
Glyma.01G024800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2527581-2537580 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312692 5265 Fabidae View MSA
124074874 5270 Rosid View MSA
123750094 5271 Pentapetalae View MSA
122793995 5272 Eudicot View MSA
122043440 5273 Angiosperm View MSA
121347937 5274 Embryophyte View MSA
123424464 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.236311 0.0 0.902441   High
cufflinks 0.0114493 0.0 0.0519226 Low Low
cufflinks 0.0360474 0.0 0.148714 Low  
cufflinks 0.173097 0.0 0.670103 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0219554 0.0 0.0940905 Low  
cufflinks 0.295434 0.0 1.11825   High
cufflinks 0.0584207 0.0 0.235673 Low  
cufflinks 0.0236396 0.0 0.100749 Low  
cufflinks 0.006     Low  
cufflinks 0.003     Low Low
cufflinks 0.015     Low  
cufflinks 0.02     Low  
cufflinks 0.006     Low  
cufflinks 0.003     Low Low
cufflinks 0.096     Low High
cufflinks 0.012     Low  
cufflinks 0.056     Low  
cufflinks 0.01     Low  
cufflinks 0.087     Low High
cufflinks 0.005     Low  
cufflinks 0.145       High
cufflinks 0.086     Low High
cufflinks 0.006     Low  
cufflinks 0.092     Low High
cufflinks 0.015     Low  

0 Strain