Gene : Glyma.01G023100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR18937//PTHR18937:SF222 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER Genomic Order:  231
Name:  ? Glyma.01G023100 Secondary Identifier:  ? PAC:30542480
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G023100 0.5kb upstream 0.5kb upstream 3659 true Chr01: 2327216-2330874 Glycine max
Glyma.01G023100 0.5kb upstream 0.5kb upstream 500 false Chr01: 2327216-2327715 Glycine max
Glyma.01G023100 0.5kb downstream 0.5kb downstream 3659 true Chr01: 2327716-2331374 Glycine max
Glyma.01G023100 0.5kb downstream 0.5kb downstream 500 false Chr01: 2330875-2331374 Glycine max
Glyma.01G023100 1.0kb upstream 1.0kb upstream 4159 true Chr01: 2326716-2330874 Glycine max
Glyma.01G023100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2326716-2327715 Glycine max
Glyma.01G023100 1.0kb downstream 1.0kb downstream 4159 true Chr01: 2327716-2331874 Glycine max
Glyma.01G023100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2330875-2331874 Glycine max
Glyma.01G023100 2.0kb upstream 2.0kb upstream 5159 true Chr01: 2325716-2330874 Glycine max
Glyma.01G023100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2325716-2327715 Glycine max
Glyma.01G023100 2.0kb downstream 2.0kb downstream 5159 true Chr01: 2327716-2332874 Glycine max
Glyma.01G023100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2330875-2332874 Glycine max
Glyma.01G023100 5.0kb upstream 5.0kb upstream 8159 true Chr01: 2322716-2330874 Glycine max
Glyma.01G023100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2322716-2327715 Glycine max
Glyma.01G023100 5.0kb downstream 5.0kb downstream 8159 true Chr01: 2327716-2335874 Glycine max
Glyma.01G023100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2330875-2335874 Glycine max
Glyma.01G023100 10.0kb upstream 10.0kb upstream 13159 true Chr01: 2317716-2330874 Glycine max
Glyma.01G023100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2317716-2327715 Glycine max
Glyma.01G023100 10.0kb downstream 10.0kb downstream 13159 true Chr01: 2327716-2340874 Glycine max
Glyma.01G023100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2330875-2340874 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041045 5273 Angiosperm View MSA
122297133 5265 Fabidae View MSA
124073279 5270 Rosid View MSA
123750946 5271 Pentapetalae View MSA
122787663 5272 Eudicot View MSA
121351089 5274 Embryophyte View MSA
123382004 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0426712 0.0 0.172169 Low  
cufflinks 0.115914 0.0 0.570978 Low High
cufflinks 0.011791 0.0 0.0543366 Low  
cufflinks 0.00651233 0.0 0.0348289 Low Low
cufflinks 0.0140474 0.0 0.0627707 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low Low
cufflinks 0.054     Low High
cufflinks 0.008     Low  
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.005     Low  
cufflinks 0.17       High
cufflinks 0.011     Low  
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain