Gene : Glyma.01G021600 G. max Wm82.a2.v1
Defline:  (1 of 10) PF07524 - Bromodomain associated Genomic Order:  216
Name:  ? Glyma.01G021600 Secondary Identifier:  ? PAC:30544013
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G021600 0.5kb upstream 0.5kb upstream 4940 true Chr01: 2189923-2194862 Glycine max
Glyma.01G021600 0.5kb upstream 0.5kb upstream 500 false Chr01: 2194363-2194862 Glycine max
Glyma.01G021600 0.5kb downstream 0.5kb downstream 4940 true Chr01: 2189423-2194362 Glycine max
Glyma.01G021600 0.5kb downstream 0.5kb downstream 500 false Chr01: 2189423-2189922 Glycine max
Glyma.01G021600 1.0kb upstream 1.0kb upstream 5440 true Chr01: 2189923-2195362 Glycine max
Glyma.01G021600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2194363-2195362 Glycine max
Glyma.01G021600 1.0kb downstream 1.0kb downstream 5440 true Chr01: 2188923-2194362 Glycine max
Glyma.01G021600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2188923-2189922 Glycine max
Glyma.01G021600 2.0kb upstream 2.0kb upstream 6440 true Chr01: 2189923-2196362 Glycine max
Glyma.01G021600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2194363-2196362 Glycine max
Glyma.01G021600 2.0kb downstream 2.0kb downstream 6440 true Chr01: 2187923-2194362 Glycine max
Glyma.01G021600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2187923-2189922 Glycine max
Glyma.01G021600 5.0kb upstream 5.0kb upstream 9440 true Chr01: 2189923-2199362 Glycine max
Glyma.01G021600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2194363-2199362 Glycine max
Glyma.01G021600 5.0kb downstream 5.0kb downstream 9440 true Chr01: 2184923-2194362 Glycine max
Glyma.01G021600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2184923-2189922 Glycine max
Glyma.01G021600 10.0kb upstream 10.0kb upstream 14440 true Chr01: 2189923-2204362 Glycine max
Glyma.01G021600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2194363-2204362 Glycine max
Glyma.01G021600 10.0kb downstream 10.0kb downstream 14440 true Chr01: 2179923-2194362 Glycine max
Glyma.01G021600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2179923-2189922 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026333 5273 Angiosperm View MSA
122300165 5265 Fabidae View MSA
124050395 5270 Rosid View MSA
123737624 5271 Pentapetalae View MSA
122789911 5272 Eudicot View MSA
121346710 5274 Embryophyte View MSA
123380433 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.2655 0.0 58.4828   High
cufflinks 12.0146 0.0 40.8449    
cufflinks 10.9821 0.0 37.2081    
cufflinks 12.8242 0.0 43.1923    
cufflinks 14.239 0.0 48.0958    
cufflinks 6.54154 0.0 20.365   Low
cufflinks 17.0562 0.0 57.5401   High
cufflinks 8.09718 0.0 28.3587   Low
cufflinks 11.2852 0.0 38.1299    
cufflinks 1.633       Low
cufflinks 2.108        
cufflinks 3.09        
cufflinks 2.341        
cufflinks 2.725        
cufflinks 2.937        
cufflinks 4.622       High
cufflinks 0.977       Low
cufflinks 3.065        
cufflinks 3.44        
cufflinks 6.589       High
cufflinks 2.056        
cufflinks 5.72       High
cufflinks 2.719        
cufflinks 2.169        
cufflinks 5.246       High
cufflinks 1.955        

0 Strain