Gene : Glyma.01G026800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10210:SF45 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 3, CHLOROPLASTIC Genomic Order:  268
Name:  ? Glyma.01G026800 Secondary Identifier:  ? PAC:30545107
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY0-662 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G026800 0.5kb upstream 0.5kb upstream 4710 true Chr01: 2818564-2823273 Glycine max
Glyma.01G026800 0.5kb upstream 0.5kb upstream 500 false Chr01: 2818564-2819063 Glycine max
Glyma.01G026800 0.5kb downstream 0.5kb downstream 4710 true Chr01: 2819064-2823773 Glycine max
Glyma.01G026800 0.5kb downstream 0.5kb downstream 500 false Chr01: 2823274-2823773 Glycine max
Glyma.01G026800 1.0kb upstream 1.0kb upstream 5210 true Chr01: 2818064-2823273 Glycine max
Glyma.01G026800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2818064-2819063 Glycine max
Glyma.01G026800 1.0kb downstream 1.0kb downstream 5210 true Chr01: 2819064-2824273 Glycine max
Glyma.01G026800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2823274-2824273 Glycine max
Glyma.01G026800 2.0kb upstream 2.0kb upstream 6210 true Chr01: 2817064-2823273 Glycine max
Glyma.01G026800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2817064-2819063 Glycine max
Glyma.01G026800 2.0kb downstream 2.0kb downstream 6210 true Chr01: 2819064-2825273 Glycine max
Glyma.01G026800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2823274-2825273 Glycine max
Glyma.01G026800 5.0kb upstream 5.0kb upstream 9210 true Chr01: 2814064-2823273 Glycine max
Glyma.01G026800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2814064-2819063 Glycine max
Glyma.01G026800 5.0kb downstream 5.0kb downstream 9210 true Chr01: 2819064-2828273 Glycine max
Glyma.01G026800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2823274-2828273 Glycine max
Glyma.01G026800 10.0kb upstream 10.0kb upstream 14210 true Chr01: 2809064-2823273 Glycine max
Glyma.01G026800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2809064-2819063 Glycine max
Glyma.01G026800 10.0kb downstream 10.0kb downstream 14210 true Chr01: 2819064-2833273 Glycine max
Glyma.01G026800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2823274-2833273 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304416 5265 Fabidae View MSA
124068369 5270 Rosid View MSA
123738172 5271 Pentapetalae View MSA
122787555 5272 Eudicot View MSA
122048410 5273 Angiosperm View MSA
121347977 5274 Embryophyte View MSA
123424356 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.85099 0.0 9.04091    
cufflinks 8.41602 0.0 23.2923    
cufflinks 1.72346 0.0 5.843   Low
cufflinks 15.8518 0.0 42.3953    
cufflinks 9.04242 0.0 24.8552    
cufflinks 3.40886 0.0 10.5277    
cufflinks 33.0783 0.0 89.4959 High High
cufflinks 6.04592 0.0 17.274    
cufflinks 6.76074 0.0 19.0735    
cufflinks 2.554        
cufflinks 0.195       Low
cufflinks 2.274        
cufflinks 3.147        
cufflinks 4.142       High
cufflinks 0.256       Low
cufflinks 1.724        
cufflinks 0.838        
cufflinks 4.808       High
cufflinks 3.064        
cufflinks 1.328        
cufflinks 0.507        
cufflinks 1.712        
cufflinks 2.941        
cufflinks 0.406       Low
cufflinks 1.47        
cufflinks 0.802        

0 Strain